Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq677 82.4 1e-10 seq336 82.4 1e-10 >seq677 Length=7529 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8660 CTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCC 8719 ||||||||||||||||||||||| |||| ||||| | |||| |||| |||||| |||||| Sbjct 570 CTCGTTAGTATAGTGGTTAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCC 511 Query 8720 CGACG 8724 |||| Sbjct 510 GGACG 506 >seq336 Length=14926 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8660 CTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCC 8719 ||||||||||||||||||||||| |||| ||||| | |||| |||| |||||| |||||| Sbjct 6921 CTCGTTAGTATAGTGGTTAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCC 6862 Query 8720 CGACG 8724 |||| Sbjct 6861 GGACG 6857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652798970295040