Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 194 2e-44 seq2451 120 3e-22 seq170 102 8e-17 >seq1 Length=157016 Score = 194 bits (214), Expect = 2e-44 Identities = 659/1008 (65%), Gaps = 43/1008 (4%) Strand=Plus/Plus Query 147234 CGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGAT 147293 ||| || |||||| | | || | ||| || || | |||||||||||| | ||||| | Sbjct 22445 CGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCAC 22504 Query 147294 ACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTG 147353 || | |||||| || || || |||||||| | ||| || | | | ||| |||| Sbjct 22505 GCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGGGGTAGTA 22564 Query 147354 GTTGCGATCAATAATCTTGTTGAGGTT--ACGCACTACAACTTTAGTTATTGTTTTGAGT 147411 |||| ||||| | ||| ||||| ||| | || | || || | | ||| Sbjct 22565 ACTGCGGTCAATGACGCGGTTCAGGTTGTACGTA--ACGTCCTTGGTGACCTCATAGAGG 22622 Query 147412 TTCTCGAAATCATAAGTCCCGTCTTCGACACGT--ACGCATTGGTTCACGGCGATAGACG 147469 | | || || || | |||| ||||| || | | | | | |||||| || | Sbjct 22623 CGTTGGTGGTCG-AACACCTG-CTTCTCCACGTCGACAAACTTGCTGAGGGCGATGGAGG 22680 Query 147470 CCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGT 147529 | || ||||||||||| ||||| || | | |||||| | || || | |||||| | Sbjct 22681 CGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGAT 22740 Query 147530 TGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGA 147589 || ||| || ||| |||||||| | ||||||| |||| ||||| ||||| ||| Sbjct 22741 TGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGT 22800 Query 147590 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGT 147646 | |||||| | || ||||||||||| || | | ||| ||||| || || Sbjct 22801 ACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCA---CAAGT 22857 Query 147647 CCTGCGCTCGCACCCGCT----GCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAAC 147702 ||||||| | | | || ||| || |||| ||||||||| ||||||| | Sbjct 22858 CCTGCGCCGGAATCGTCTTGACGCCCATT----CCCTTCTTTTCGTACTCCTCGTACTTC 22913 Query 147703 CGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAG 147761 ||||| ||||| ||||||||||| ||| ||||| | ||| | || || | |||||| Sbjct 22914 CGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGGGGTC-CATCAG 22972 Query 147762 CGACCACATGTCG-TCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGT 147820 || |||| |||| ||| | || || || ||| || ||||| || | ||| || |||| Sbjct 22973 CGTCCAC-TGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGT 23031 Query 147821 ACATAAGATCGCGCGCT--TTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAA-GCA 147877 | | |||||||| || ||| ||||| || |||| || |||| | | | Sbjct 23032 AAAACAGATCGCGGGCACGTTGG--TCCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAA 23089 Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTTC 147937 | | | | | |||||||||||| || || | ||| ||||| | ||||| |||||||| | Sbjct 23090 CTCGA-ACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTAC 23148 Query 147938 CG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994 || |||||||| || | ||| | |||| || ||||| || | |||||| | || | Sbjct 23149 CGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGAC 23208 Query 147995 CGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGT 148054 || | | || ||||| || ||| | || ||| | || | | ||| |||| Sbjct 23209 CGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGT 23268 Query 148055 TAACGCCAATGCC----GCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTG 148110 | ||||| || |||||| |||| |||| ||||| || | || | Sbjct 23269 GGAACCCAATACCACCGGCCGCCTTACT----GATGGTGGCGCACTCCTTGAGGGTGTCG 23324 Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGA 148170 || ||||| ||||| ||||||| || | | | | | || || |||| ||| || || Sbjct 23325 TAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGC 23384 Query 148171 ATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAAT 148218 || | || || || ||| ||||| || | ||||| ||||| ||| Sbjct 23385 TTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAAT 23432 >seq2451 Length=1853 Score = 120 bits (132), Expect = 3e-22 Identities = 179/247 (72%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 ||||| ||||||||||||||||||||| | || || |||||||| || || ||||||||| Sbjct 1056 ATGCCCGGCCTGACGTTCAGTAACGAGCTCATTTCCCGCGACGAGGGTCTGCACACGGAC 1115 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAA-ATTAAACTCGGACACGATCCT 47032 ||||| || ||| ||||| | | | | || | || | | || || || | || Sbjct 1116 TTTGCCTGCCTCCTGTACAACAGCCACATCAAGCACAAGCTGCCCCGCGAACGCG-TGCT 1174 Query 47033 GAGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGC--GGCGCTGCCC 47090 || ||| | | ||| || || ||||| |||||||| | |||| | |||||||| Sbjct 1175 GAACATCATCACGGACGCTGTTGCGATCGAGAAGGAGTTCAT--CTGCGAGTCGCTGCCC 1232 Query 47091 GT-CGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGA 47149 || |||| || | ||||||||||| | ||| || | || ||||||||||| ||||| Sbjct 1233 GTGCGCC-TGATTGGCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGA 1291 Query 47150 TCGTCTG 47156 |||||| Sbjct 1292 CCGTCTG 1298 >seq170 Length=23694 Score = 102 bits (112), Expect = 8e-17 Identities = 241/354 (68%), Gaps = 10/354 (3%) Strand=Plus/Plus Query 46925 GACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT 46984 |||||||||||||||| | || || ||||| || || || |||||||||||||| || || Sbjct 1 GACGTTCAGTAACGAGCTCATTTCCCGCGATGAGGGTCTGCACACGGACTTTGCCTGCCT 60 Query 46985 CTATTACAAGACGCGCGTGAATGAGAA-ATTAAACTCGGACACGATCCTGAGCATGTTTA 47043 | ||||| | | | | || | || | | || || || | |||| ||| | | Sbjct 61 CCTGTACAACAGCCACATCAAGCACAAGCTGCCCCGCGAACGCG-TGCTGAACATCATCA 119 Query 47044 GGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGC--GGCGCTGCCCGT-CGCCTTGC 47100 ||| || || ||||| |||||||| | |||| | |||||||||| |||| || Sbjct 120 CGGACGCTGTTGCGATCGAGAAGGAGTTCAT--CTGCGAGTCGCTGCCCGTGCGCC-TGA 176 Query 47101 TGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGG 47160 | ||||||||||| | ||| || | || ||||||||||| ||||| |||||| | | Sbjct 177 TTGGCATGAACGCGGACCTGATGAGCCAGTACATTGAGTTTGTTGCGGACCGTCTGCTTG 236 Query 47161 TGCAGCTCGGACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACA 47220 | ||||| | ||| | | ||| || || ||||| || ||| | | | Sbjct 237 TTTCCCTCGGTGAGGAGAAGCACTACGGTGCGACGAACCCTTTTGACTTCATGGAGATGA 296 Query 47221 TTTCGCTCGA-GGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTATAAG 47273 |||| || || || || ||||| |||||||| || || || |||||| || Sbjct 297 TTTC-CTTGACCGGTAAGACCAACTTTTTCGAAAAGAAGGTTGGTGAGTATCAG 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476577741893760