Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3993 114 1e-20 seq587 111 2e-19 seq2451 109 6e-19 seq5243 107 2e-18 seq2033 107 2e-18 seq4373 105 7e-18 seq1880 105 7e-18 seq4543 104 2e-17 seq5372 100 3e-16 seq1 87.8 2e-12 seq5492 82.4 8e-11 >seq3993 Length=1029 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 68 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 127 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | |||||||| || || || ||||| || Sbjct 128 CCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCC 187 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | | Sbjct 188 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCA 247 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||||||||| || || ||||| ||||| || Sbjct 248 ATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 288 >seq587 Length=8987 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| ||||| || |||||||||||| | | |||| | Sbjct 1902 AGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG 1843 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | ||||||||| || || || || ||||| Sbjct 1842 CCCTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCC 1783 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | |||||| | || || ||||| | Sbjct 1782 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCG 1723 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| |||||||| | || || |||||||| |||||| Sbjct 1722 ATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 1684 >seq2451 Length=1853 Score = 109 bits (120), Expect = 6e-19 Identities = 216/317 (68%), Gaps = 16/317 (5%) Strand=Plus/Minus Query 21540 CAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACAG 21599 || ||| ||||| || || |||||||| || | ||| ||| |||||||| | ||| Sbjct 1298 CAGACGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAG 1239 Query 21600 ATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCAT 21659 || || |||| ||| || |||||||||||||| || || || ||| |||| || Sbjct 1238 GCGCACGGGCAGCGACTCGCAGATGAACTCCTTCTCGATCGCAACAGCGTCCGTGATGAT 1179 Query 21660 G----GCGTGTATTTCACCGGCGGACAATTTGTCTTGAGGCTCGATGTATTTGTTGTAGT 21715 | || | || || || || |||| ||| ||||| ||||||| Sbjct 1178 GTTCAGCACGCGTT----CGCGGGGCAGCTTGT------GCTTGATGTGGCTGTTGTACA 1129 Query 21716 AGAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACG 21775 ||| || ||||| | ||||||| ||||||||||| ||||| | ||||| ||||||| Sbjct 1128 GGAGGCAGGCAAAGTCCGTGTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACG 1069 Query 21776 TGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCA-AAGCTACCGGaa 21834 | || |||||||| | ||| || || || | | | || || |||| ||| ||||| Sbjct 1068 TCAGGCCGGGCATCACACCGCGCTTCTTCA-GCCAGAAGATGGCGCAGAAGGAGCCGGAG 1010 Query 21835 aaaaaCACGCCCTCCAC 21851 || || | |||||||| Sbjct 1009 AAGAAGATACCCTCCAC 993 >seq5243 Length=600 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| || || || ||||||||||| | | |||| | Sbjct 563 AGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGG 504 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || || || || | ||||||||| || || || || ||||| Sbjct 503 CCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCC 444 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | |||||| | || || ||||| | Sbjct 443 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCG 384 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| |||||||| | || || |||||||| |||||| Sbjct 383 ATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 345 >seq2033 Length=2245 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| || || || ||||||||||| | | |||| | Sbjct 425 AGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGG 366 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || || || || | ||||||||| || || || || ||||| Sbjct 365 CCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCC 306 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | |||||| | || || ||||| | Sbjct 305 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCG 246 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| |||||||| | || || |||||||| |||||| Sbjct 245 ATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 207 >seq4373 Length=891 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| ||| ||| | Sbjct 655 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGG 714 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | |||||||| || || || ||||| || Sbjct 715 CCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCC 774 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | | Sbjct 775 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCA 834 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 835 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 872 >seq1880 Length=2433 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 2212 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 2271 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | ||||||||| || || || ||||| || Sbjct 2272 CCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCC 2331 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | | Sbjct 2332 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCA 2391 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 2392 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 613 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 672 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | ||||||||| || || || ||||| || Sbjct 673 CCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCC 732 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | | Sbjct 733 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCA 792 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 || || || ||||| | || || ||||| || |||| Sbjct 793 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq5372 Length=561 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 54 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 113 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | |||||||| || || || ||||| || Sbjct 114 CCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCC 173 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | | Sbjct 174 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCA 233 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 234 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 282 AGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 341 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || ||||| | |||||||| || || || ||||| || Sbjct 342 CCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCC 401 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| ||||| | | Sbjct 402 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCGAGGGCA 461 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 462 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq1 Length=157016 Score = 87.8 bits (96), Expect = 2e-12 Identities = 365/566 (64%), Gaps = 19/566 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | ||||| |||||| | || ||||| || | |||| || ||| || Sbjct 23518 CAGCAAATGATATTGCGTGTGGCGATTGGTATTCATGGAAACAACATGGAG--CGCATTC 23461 Query 7624 GAA--ACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTG 7681 | || ||| | | ||||| ||| | ||||| ||||| | || ||| |||| Sbjct 23460 GCCGCACCTACGATCTCATGTCCTTGGGATTCTTTACCCACGCCACCCCTACCCTGTTCA 23401 Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 ||| || || |||||| || || || || | | ||||| || |||| Sbjct 23400 ACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTCGTGGCCATGAAGGACGACA 23341 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCA--AATACGGC-G 7798 | ||||| ||||||||| |||| || || ||||||| || || || |||| | Sbjct 23340 GTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACCAT---CAGTAAGGCGGCCG 23284 Query 7799 GCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCA 7858 | || || || | |||| || || | ||| | |||||| ||||| || | Sbjct 23283 GTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGTTACATCGCCGGTACGA 23224 Query 7859 ACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATG 7918 |||| | ||| |||| | | ||||||| | || |||||||||||| | | || | | Sbjct 23223 ACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACG 23164 Query 7919 TAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACG 7975 | |||||| || || ||||| || || ||| ||| | || | ||||||||||||| Sbjct 23163 TGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACG 23104 Query 7976 CGGACATTTACGCAGTGC-TAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAA--AG 8032 | ||| | | || ||| | | ||| || |||| ||| || ||| ||| | Sbjct 23103 CCGACGTGTTCG-AGTTCGTCCGCCTGAAGCGAAACACCGGTAAGGAGGAC--CAACGTG 23047 Query 8033 CGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCG 8092 | |||||||| || | || | ||| | || ||||| || |||| ||| || | | Sbjct 23046 CCCGCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGG 22987 Query 8093 ACGCACAATGGTCGCTCATGTGCCCC 8118 | | ||| ||| |||| ||| |||| Sbjct 22986 AGGGACAGTGGACGCTGATGGACCCC 22961 >seq5492 Length=529 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 134532 ATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGC 134591 ||||||||||| || |||| | || |||||||| || || || || || | |||| Sbjct 529 ATGTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGC 470 Query 134592 TGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTG 134651 ||||| || || || || ||||| || || || || || ||||| || | ||| Sbjct 469 TGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTG 410 Query 134652 TCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 ||| | || || ||||| | ||||| |||||||| | || || |||||||| ||| Sbjct 409 TCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGC 350 Query 134712 ATT 134714 ||| Sbjct 349 ATT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505362921032320