Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5243 86.0 5e-12 seq2033 86.0 5e-12 >seq5243 Length=600 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || |||||||| | | |||| | || |||||||| ||||| Sbjct 542 GTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCA 483 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||| || || || ||||||| || Sbjct 482 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTG 423 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| |||| || || || || | || | || || || || || Sbjct 422 ACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTC 363 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| || || ||||| Sbjct 362 TTCACGAAAATCTGCAT 346 >seq2033 Length=2245 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || |||||||| | | |||| | || |||||||| ||||| Sbjct 404 GTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCA 345 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | ||| || || || ||||||| || Sbjct 344 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTG 285 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| |||| || || || || | || | || || || || || Sbjct 284 ACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTC 225 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| || || ||||| Sbjct 224 TTCACGAAAATCTGCAT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424905315364992