Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 244 1e-59 seq2451 136 5e-27 seq4129 84.2 3e-11 >seq1 Length=157016 Score = 244 bits (270), Expect = 1e-59 Identities = 942/1462 (64%), Gaps = 26/1462 (2%) Strand=Plus/Plus Query 118120 TGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 118179 |||| ||| |||||||| ||| || || || |||||||| || || | | Sbjct 22078 TGAGGTCCATCACGAGATACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGA 22137 Query 118180 GATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 118239 || || || | |||| | ||||| |||||||| |||||||||| || || | |||| Sbjct 22138 CGTAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGG 22197 Query 118240 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT 118299 |||| ||||||||||| |||| ||| ||| |||||| | ||||| ||| | | || | Sbjct 22198 AGGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCT 22257 Query 118300 CCTTGAGAGCGTCCCAGTCGTAGTTGA-GCT--TTGTCTCCCCCTGCCACATATCAAACT 118356 |||||| || ||||||| || | ||| | | || || ||| | || |||| Sbjct 22258 TCTTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCTGTTTCTCCCATAAGTCGAACT 22317 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | || | || | || || || |||| || |||||||| || ||||| ||||||| Sbjct 22318 GCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTCCG 22377 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 | | || | | | ||| | || |||| || || || || || || |||| | Sbjct 22378 CGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATTGA 22437 Query 118477 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGAC 118536 || ||||| ||| || | ||| ||| | |||||| |||| || || | Sbjct 22438 GCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCC 22497 Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGG 118596 | || || || ||||| || ||||| || | | || | || || || ||||||| Sbjct 22498 CCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGG 22557 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 | || || | | || || || | || || || | || || |||| |||| |||| Sbjct 22558 GGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTCAT 22617 Query 118657 GAAGCTTTTCGTAATCAAAA--CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 || || || || || |||| |||| | | |||| |||| |||||||| Sbjct 22618 AGAGGCGTTGGTGGTCGAACACCTGCT--TCTCCACGTCGACAAACTTGCTGAGGGCGAT 22675 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || || || || || || | |||||||||||| |||||||| ||||| |||||||| Sbjct 22676 GGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCA 22735 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 || || || | ||| ||||| ||||| ||||| ||||| || || |||| || || || Sbjct 22736 CAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTC 22795 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 |||||| |||||| | || || ||||| || |||||| |||| || | ||| | Sbjct 22796 CTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCACAA 22855 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAG 118951 || | || | | | | | ||| | | | |||| | ||||||| ||| Sbjct 22856 GTC--CTGC-GCCGGAATCGTCTTGACGCCCATTCCCTTCTTTTCGTACTCCTCGTACTT 22912 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC-CTTATCTGGGCAGAAGA 119010 || ||||| || || | || || ||| |||| | | ||| | | Sbjct 22913 CCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCT-GTGCACACGTTGGGGTCCATCA 22971 Query 119011 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070 | | ||| || || |||||| || |||||||||||||| || || ||||| || || Sbjct 22972 GCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGT 23031 Query 119071 AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129 | || ||||| | | || | | || | | || || || | || | || Sbjct 23032 AAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTG-TTTCGCTTCAGGCGGACGAAC 23090 Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 119186 || | | || ||||||||||| || |||||||| |||| | |||||||| || Sbjct 23091 TCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCG 23150 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| |||||| || || | || ||| || || ||||| ||||| || | || ||| Sbjct 23151 CCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCG 23210 Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCGTGGATGT 119304 | ||| || || || ||| | | ||| | | | || | ||| | || Sbjct 23211 TTGGAGGTACCGTTCGT--ACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGT 23268 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 | | |||||||| || ||| ||| ||| ||||||||| |||| || |||| | Sbjct 23269 GGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAA 23328 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424 | |||||||| ||| |||| | || | |||||||||| ||| |||||| | | Sbjct 23329 TGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCG 23388 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484 | ||||| |||||||| || || || || |||||| | || | || |||||| | Sbjct 23389 GGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGAT 23448 Query 119485 CGTAGGTCTCCAAGACGGCG-GGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543 ||||||| | || ||| |||| | || |||||||| |||| || |||| Sbjct 23449 CGTAGGT-GCGGCGAATGCGCTCCATGTTGTTTCCATGAATACCAATCGCCACACGCAAT 23507 Query 119544 AACATGTATTGGGGTGTTTCCA 119565 | ||| | |||||| | |||| Sbjct 23508 ATCATTTGCTGGGGTCTCTCCA 23529 >seq2451 Length=1853 Score = 136 bits (150), Expect = 5e-27 Identities = 532/819 (65%), Gaps = 32/819 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || |||||| ||| ||||| ||||| ||||| ||| |||| || ||||||| Sbjct 1411 TACTCACCAACCTTCTTATCGAAAAAGTTGGTCTTACCGGTCAAGGAAATCATCTCCATG 1352 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGA-----GGA 129842 || ||||| |||||| | | || | |||| |||| | | || | | Sbjct 1351 AAGTCAAAAGGGTTCGTCGCA--CCGTAGTGCTT---CTCCTCACCGAGGGAAACAAGCA 1297 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| |||| || |||||||||||| |||| || | |||||| || || ||| Sbjct 1296 GACGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAGGC 1237 Query 129903 TACATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || ||| |||| || |||||||| ||||||| || | ||||| ||| | |||| Sbjct 1236 G-CACGGGCAGCGACTCGCAGATGAACTCCTTCTCGATCGCAACAGCGTCCGTGATGATG 1178 Query 129962 GCGTGAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTCCACGG 130016 | | | || || | ||| || ||| | || ||| | || || Sbjct 1177 TTCAGCACGCGTTCGCGGGGCAG--CTTGTGCTTGATGTGGCTGTTGTACAGGAGGCAGG 1120 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 |||| ||| ||| ||||||||||| ||||| ||||| || || ||| ||| || | Sbjct 1119 CAAAGTCCGTGTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCCGG 1060 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| | ||| |||||||||| |||||| || || || || ||||| ||||||||||| | Sbjct 1059 GCATCACACCGCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATAC 1000 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACC 130196 ||||||| || || ||| || |||| | | ||| | || | | | || Sbjct 999 CCTCCACGGCAGCAAAACCAATCAGGCGCT---CCTGGAAGCTCGCCTCGCTGCCGATCC 943 Query 130197 ACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA 130256 | || ||||||| |||||| |||| ||| |||||| ||||||||||| | | | Sbjct 942 AACGCACGGCCCACTCCGCCTTGTTCTGGATCGACGGGATCGTCTGGATCGCATGCAGCA 883 Query 130257 GTTCCTTCTTTTC-TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 130315 | | | ||| || | || | || |||||| |||| | || || || || ||| Sbjct 882 GCTTCACCTTCTCGTCATTG-TCGGAGATGTAGGTATCCAGCAGCACCGAGTAGGTCTCG 824 Query 130316 CCATGGACCAT-TTCATTATGGCA-CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 130373 |||| | | ||| || || ||| || ||||||| | |||||| ||| |||| Sbjct 823 GAGTGGATGTTCTCCATCAT--CAGCTGGAACCCGTAGAACGCGCGCGCCTCGGGAATCT 766 Query 130374 GTACCT-CATC-TGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 130431 || | | || || || | | || ||||||| || || || ||| ||||| Sbjct 765 TCACGTCCGTCATG--AAGCGCTGAGCGAGGTTCTCAATCACGATGCCGTCGCTGCCAGC 708 Query 130432 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTC 130491 ||| || |||| | ||||| ||||| | ||| ||| ||| |||| || |||||| Sbjct 707 AAAGAAGGCCAACACGTACTTGATGAAGTGCTGCTCACCCTCCGTCAGCTTCACCCAGTC 648 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 | || || ||| || || | ||| ||| ||||| Sbjct 647 AACCAGGTCGTTCCCCAGGTCAATCTCTTCCAACGTCCA 609 >seq4129 Length=974 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 11913 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTC 11972 ||| | |||||||| ||||| || ||||| || | | |||||| |||||||||||| Sbjct 11 TGGATAGTGAAGAACTACCGCGAGTCCTACGGCATGTACGCGTGCAACGGTATTCTCTTC 70 Query 11973 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC 12023 |||||||| || |||||||| || | | ||||| || | ||||||||| Sbjct 71 AACCACGAATCCCCCCGTCGAGGACAGACCTTCGTCACGAGAAAGATCACC 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618391785848960