Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 251 8e-62 seq2451 132 5e-26 seq170 98.7 1e-15 seq40 95.1 1e-14 >seq1 Length=157016 Score = 251 bits (278), Expect = 8e-62 Identities = 371/516 (72%), Gaps = 12/516 (2%) Strand=Plus/Minus Query 53272 CTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAG 53331 |||||| |||||||| || |||||||||||||| ||||| | ||||||||| Sbjct 23429 CTTTACCCACGCCACCCCTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTC 23370 Query 53332 CTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGA 53391 ||||||||| ||||| |||||||| ||| ||||| ||||| ||||| || |||||||| Sbjct 23369 CTGCTTCCTCGTGGCCATGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGA 23310 Query 53392 GTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGTCCGTG 53450 ||| ||| |||| ||| | | |||||||| || ||||| | || ||| |||| Sbjct 23309 GTGCGCCACCATCAGTAAGGCGGCCGGTGGTATTGGGTTCCAC-GTTCACAACATCCGCT 23251 Query 53451 CGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCC 53510 | ||| | ||| || |||||||| | || | || ||||||| ||||||| Sbjct 23250 CTTCCGGTAGTTACATCGCCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCC 23191 Query 53511 GCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGT 53570 | || ||||| ||||| ||||| ||||| |||||||||| || ||||| ||||| | | Sbjct 23190 GTGTGTTCAATAACACCGCCCGCTACGTGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCT 23131 Query 53571 TCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGA 53630 ||||| | |||||||||||||||||||||||| | | ||||| || ||| | || Sbjct 23130 TCGCCGTGTACCTCGAGCCGTGGCACGCCGACGTGTTCGAGTTCGTCCGCCTGAAGC-GA 23072 Query 53631 ATCA-GGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGAC 53689 | || ||| | || || || ||| || |||||| || || |||||||| || Sbjct 23071 AACACCGGTAAGGAGGACCAACGTGCCCGCGATCTGTTTTACGCCCTTTGGATTCCTGAT 23012 Query 53690 CTCTTCATGCAAAAGGTGGAGAAGGACGAGG---AGTGGTACCTGATGTGCCCGAACGAG 53746 ||||||||| ||| | ||||| |||| ||||| |||||| ||| |||| | Sbjct 23011 CTCTTCATG---AAGCGTGTCAAGGAGGAGGGACAGTGGACGCTGATGGACCCCAACGTG 22955 Query 53747 TGCCCCGGCCTCCAGGGTGT-CTACGGTGAGGAGTT 53781 ||| | ||||| || | | |||||| |||||||| Sbjct 22954 TGCACAGGCCT-GAGCGACTGCTACGGCGAGGAGTT 22920 Score = 129 bits (142), Expect = 6e-25 Identities = 303/449 (67%), Gaps = 9/449 (2%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 || |||||||| ||| ||||||| ||||| ||||| || || ||||||| |||| ||| Sbjct 22234 CGTAACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCAGATTCTGGGTAAC 22175 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCT-AGCAGGTGA 55602 |||||| |||||||| | |||| | ||||| ||| | || || || ||| ||||| Sbjct 22174 AACGAGTGCTTCGAGCCCTTCACGTCGAACATTTACGTCCGTCGTGTGCTGAGC-GGTGA 22116 Query 55603 GTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCC 55662 ||| || | |||||| | ||||| | |||||| ||| |||| ||||||| Sbjct 22115 GTTCCCGGTGGTGAACAAGTATCTCGTGATGGACCTCATCAAGCGCAACCTGTGGAACGA 22056 Query 55663 GCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAGATT--CCT 55720 ||||| | || || | | || |||||| | ||| | | || Sbjct 22055 TGAGATCCGTAACGAAATCATCACCTTCAACGGCTCCGTCGCTGGTGTGGCGGGTATCCC 21996 Query 55721 CTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGA 55779 | || | |||||||| | ||||| || ||||||||||| | ||| ||||| || Sbjct 21995 CGACGACATCAAGGAGCTCTACCGCACCGTGTGGGAGATCTCCCAGCGTCAGCTGATCGA 21936 Query 55780 CATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGA 55839 ||| || | || | ||| || |||||||| ||||| ||||| ||| | | || Sbjct 21935 TATGGCCGCGGCCCGCGCCAAGTATATTGACCAGTCGCAGTCCATGAACCTCTACCTCGA 21876 Query 55840 GA-ATCCTTCACTGGCCAAGT-TGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897 || ||| | | |||| || | | ||| |||||||| || | ||| || ||||| Sbjct 21875 GAGCCCCTCCTCCGGCC--GTATCACCTCCATGCACTTCCACTGCTGGCAGTCTGGACTG 21818 Query 55898 AAGACGGGTATGTACTATCTGCGGACCCG 55926 |||||||| |||||||| || || ||||| Sbjct 21817 AAGACGGGCATGTACTACCTCCGCACCCG 21789 >seq2451 Length=1853 Score = 132 bits (146), Expect = 5e-26 Identities = 527/817 (65%), Gaps = 27/817 (3%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || ||||| ||| ||| || |||||||||||||| || ||| || || ||||||| Sbjct 1411 TACTCACCAACCTTCTTATCGAAAAAGTTGGTCTTACCGGTCAAGGAAATCATCTCCATG 1352 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTG---CCATGAGG 74579 |||| ||||||||| | |||||||| |||||||| || | | | | || Sbjct 1351 AAGTCAAAAGGGTTCGTCGCACCGTA---GTGCTTCTCCTCACCGAGGGAAACAAGCAGA 1295 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 || ||||| ||||| | ||||||||| |||| |||| | |||||| || || | Sbjct 1294 CGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAG-GCG 1236 Query 74640 CAC-GGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAA----GCCCATTGGACAA 74694 ||| ||||| | |||| ||| ||||| |||| | |||||| | || | || | Sbjct 1235 CACGGGCAGCGACTCGCAGATGAACTCCTTCTCGA--TCGCAACAGCGTCCGT--GATGA 1180 Query 74695 TCTTGTGAATGTCTTTGGAAGGGCA-CTTTTCCCTCAGGTGAGAGT----AAAGCGTCAC 74749 | || | | | | || | ||||| ||| | | | | ||| || | | | || Sbjct 1179 TGTTCAGCACG-CGTTCGCGGGGCAGCTTGTGCTTGATGTGGCTGTTGTACAGGAGGCA- 1122 Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| ||| ||| || || || | | || | || || |||| ||||| Sbjct 1121 GGCAAAGTCCGTGTGCAGACCCTCGTCGCGGGAAATGAGCTCGTTACTGAACGTCAGGCC 1062 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| | || |||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct 1061 GGGCATCACACCGCGCTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGAT 1002 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCA 74929 || || || ||||| | | ||||| | | ||| || ||| ||||| Sbjct 1001 ACCCTCCACGGCAGCAAAACCAATCAGGCGCTCCTGGAAGCTCGCCTCGCTGCCGATCCA 942 Query 74930 AGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAG 74989 | | ||||| || || || | || || |||| || | |||||| || | || Sbjct 941 ACGCACGGCCCACTCCGCCTTGTTCTGGATCGACGGGATCGTCTGGATCGCATGCAGCAG 882 Query 74990 GCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGA 75049 | ||||||| || || || | | || | || | ||||| ||||| || Sbjct 881 CTTCACCTTCTCGTCATTGTCGGAGATGTAGGTATCCAGCAGCACCGAGTAGGTCTCGGA 822 Query 75050 ATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTAC 75109 || || ||| | | | |||| || ||||||| | |||||||| | ||||| || Sbjct 821 GTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAACGCGCGCGCCTCGGGAATCTTCAC 762 Query 75110 ATCCTT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAA 75167 ||| | |||| | | ||| ||||| || ||||||||||| | | || || Sbjct 761 GTCCGTCATGAAGCGCTGA--GCGAGGTTCTCAATCACGATGCCGTCGCTGCCAGCAAAG 704 Query 75168 AAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTC 75227 || |||| || ||||| ||||| ||||| | || || || || |||| || | Sbjct 703 AAGGCCAACACGTACTTGATGAAGTGCTGCTCACCCTCCGTCAGCTTCACCCAGTCAACC 644 Query 75228 AGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGA 75264 ||||| | ||| |||||||| || | |||||||| Sbjct 643 AGGTCGTTCCCCAGGTCAATCTCTTCCAACGTCCAGA 607 >seq170 Length=23694 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/224 (71%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 74462 ATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCAT 74521 ||| ||||| ||| |||||| |||||||||||||| || ||| || || ||||||| Sbjct 346 ATACTCACCAACCTTCTTTTCGAAAAAGTTGGTCTTACCGGTCAAGGAAATCATCTCCAT 287 Query 74522 CCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTCCCCAAACTGTG---CCATGAG 74578 |||| ||||||||| | |||||||| |||||||| || | | | | || Sbjct 286 GAAGTCAAAAGGGTTCGTCGCACCGTA---GTGCTTCTCCTCACCGAGGGAAACAAGCAG 230 Query 74579 GCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTT 74638 || ||||| ||||| | ||||||||| |||| |||| | |||||| || || Sbjct 229 ACGGTCCGCAACAAACTCAATGTACTGGCTCATCAGGTCCGCGTTCATGCCAATCAG-GC 171 Query 74639 GCAC-GGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAA 74681 |||| ||||| | |||| ||| ||||| |||| | |||||| Sbjct 170 GCACGGGCAGCGACTCGCAGATGAACTCCTTCTCGA--TCGCAA 129 >seq40 Length=48524 Score = 95.1 bits (104), Expect = 1e-14 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 152080 CCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCC 152139 || ||||| || ||| |||||||||| | || || | || ||| || || ||| Sbjct 16017 CCGAACTGACCCTCGGGGACGAGGAGGTTAATATTATTACCACCAGTGAAGTTTTGGGCC 15958 Query 152140 AAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCG 152199 | ||||||||||| ||||||| | |||||||||||| | || | ||||| Sbjct 15957 ATCTTCACAATCGTCTCCTGCAGCGACATCTCACCGTGGTGAAAGGCGGAGACCTCCGAA 15898 Query 152200 ATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCG-TCAGGTTCTTCTTGAGACAG-G 152257 ||||| |||| || ||||||||||||| || ||| | ||||||||||| ||| | Sbjct 15897 ATGTAACCCGACAGCTGCGCCACCTTCGCCGCC-TCGCTGCTATTCTTCTTGAG-CAGCG 15840 Query 152258 CGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCCAC 152297 | | | | ||| |||||||| |||||||| || ||||| Sbjct 15839 CCCACAGAATCTTACGCTGGGAGGGTTTCAACCCATCCAC 15800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547177585436800