Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq407 109 5e-19 >seq407 Length=12820 Score = 109 bits (120), Expect = 5e-19 Identities = 291/440 (66%), Gaps = 16/440 (4%) Strand=Plus/Plus Query 6529 CAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATG 6588 |||||| | ||||| ||| | ||| || ||||| || || ||||| | || || Sbjct 9326 CAGCTGCTCCTGGAGCGCCTCCACGTGATTGCTGTAGACGTGGGCGTCCCCGAGGGTGTG 9385 Query 6589 CACCAGCTCCCCAGGAACCAACCCCACGACATGAGCGATCATGTA-CGTGAGCAGAGCGT 6647 ||||||||||| || |||||| | | || |||| ||| ||| ||||| |||| Sbjct 9386 TACCAGCTCCCCTGGCTTCAACCCAGTGCTCTTGGCAATCA-GTATCGTCAGCAGGGCGT 9444 Query 6648 AACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGC 6707 | || |||||||| ||||| ||||| | |||||| || | |||||||||||| || Sbjct 9445 AGCTGGCAATGTTAAACGGTACCCCCAGCCCCATATCGCAGCTCCGTTGATAGAGCATGC 9504 Query 6708 AGGACAGCTC---CCCATTCGCG---ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGA 6761 |||||||||| | || | | ||||||||||| || ||||| || |||| Sbjct 9505 AGGACAGCTCCTGCGTGTTGGTGTTCACGTAGAATTGAGCCAGCAGATGGCATGGTGGGA 9564 Query 6762 GCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAG 6821 | |||||| | | || | ||||||||||| | || | | |||||| | | Sbjct 9565 GGGCCATCTCATGCAGCGCGGAGGGGTTCCACGCCGTAAACAGCAATCGTCTGTCGTTGG 9624 Query 6822 GGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGT 6881 |||| ||| | ||| || | | | || | || || | |||| ||| |||| Sbjct 9625 GGTTTGTCTTGAGGGTTTCCACAATTTGCTTTATTTGATCGACCCCCTTTCCGTCGTAGT 9684 Query 6882 CCGCTTCGCTCCCCCGA----TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACC 6937 || || || |||| || |||||||||| |||||| |||||||| ||| Sbjct 9685 ----TTTCCTTGAAGGAGGTGTACTTTGCACCAAAGTGTCGCCACTGAAACCCGTACACC 9740 Query 6938 GGGCCCAAGTCGCCCTCCTC 6957 ||||| | ||| |||||| Sbjct 9741 GGGCCAAGGTCCATCTCCTC 9760 Score = 109 bits (120), Expect = 5e-19 Identities = 291/440 (66%), Gaps = 16/440 (4%) Strand=Plus/Minus Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA- 34446 |||||| ||| | |||||||| |||||||| |||||| |||||||||| || |||| Sbjct 9760 GAGGAGATGGACCTTGGCCCGGTGTACGGGTTTCAGTGGCGACACTTTGGTGCAAAGTAC 9701 Query 34447 ---TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503 || || || |||| ||| |||| | || || | || | | | Sbjct 9700 ACCTCCTTCAAGGAAA----ACTACGACGGAAAGGGGGTCGATCAAATAAAGCAAATTGT 9645 Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563 || ||| | ||| ||||| | |||||| | | || | ||||||||||| Sbjct 9644 GGAAACCCTCAAGACAAACCCCAACGACAGACGATTGCTGTTTACGGCGTGGAACCCCTC 9585 Query 34564 GGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT---CGC 34620 | || | | |||||| ||||| || ||||| || ||||||||||| | | Sbjct 9584 CGCGCTGCATGAGATGGCCCTCCCACCATGCCATCTGCTGGCTCAATTCTACGTGAACAC 9525 Query 34621 GAATGGG---GAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGT 34677 || | |||||||||||| |||||||||||| | || |||||| | ||||| Sbjct 9524 CAACACGCAGGAGCTGTCCTGCATGCTCTATCAACGGAGCTGCGATATGGGGCTGGGGGT 9465 Query 34678 GCCGTTCAACATTGCTAGTTACGCTCTGCTCACG-TACATGATCGCTCATGTCGTGGGGT 34736 ||||| |||||||| || ||||| ||||| ||| ||| |||| || | | |||| Sbjct 9464 ACCGTTTAACATTGCCAGCTACGCCCTGCTGACGATAC-TGATTGCCAAGAGCACTGGGT 9406 Query 34737 TGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCG 34796 || || ||||||||||| || || | ||||| || || ||||| || ||| | | Sbjct 9405 TGAAGCCAGGGGAGCTGGTACACACCCTCGGGGACGCCCACGTCTACAGCAATCACGTGG 9346 Query 34797 AGCGGCTCCGGATCCAGCTG 34816 || ||||| | |||||| Sbjct 9345 AGGCGCTCCAGGAGCAGCTG 9326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448230931979520