Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1044 172 1e-37 seq5243 170 4e-37 seq2033 170 4e-37 seq3993 165 2e-35 seq5372 163 7e-35 seq4373 163 7e-35 seq587 163 7e-35 seq1880 159 8e-34 seq4543 158 3e-33 seq5492 136 9e-27 seq2443 109 1e-18 >seq1044 Length=4624 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || ||||| || || ||||| ||||| | || || Sbjct 924 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCC 865 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || ||||| || || | |||||||||||| Sbjct 864 TCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 805 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| | || |||||||| | ||| ||| Sbjct 804 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTC 745 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| ||||| | ||||||| Sbjct 744 TTACCGGTGAGGGTCTTCACAAAAATCTGCATT 712 >seq5243 Length=600 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct 566 CGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTG 507 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || |||||||| || |||||||| || || || ||||| || || | ||| Sbjct 506 CGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCT 447 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||||||||| | || |||||||| Sbjct 446 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGG 387 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||| ||||| || ||||| ||||| || || | ||||||| Sbjct 386 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 345 >seq2033 Length=2245 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct 428 CGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTG 369 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || |||||||| || |||||||| || || || ||||| || || | ||| Sbjct 368 CGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCT 309 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||||||||| | || |||||||| Sbjct 308 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGG 249 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||| ||||| || ||||| ||||| || || | ||||||| Sbjct 248 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 207 >seq3993 Length=1029 Score = 165 bits (182), Expect = 2e-35 Identities = 168/218 (77%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || ||||| || || | || || Sbjct 74 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 133 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || ||||| || |||||||| |||| || ||||||||| Sbjct 134 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 193 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| |||||||| ||||| ||||| ||| || |||||||| | ||| Sbjct 194 TGGATCTTCGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGGCAATC 250 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| ||||| | |||||| || Sbjct 251 GTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 288 >seq5372 Length=561 Score = 163 bits (180), Expect = 7e-35 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || ||||| || || | || || Sbjct 60 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 119 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || ||||| || ||||||||||||| || ||||||||| Sbjct 120 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 179 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| |||||||| ||||| ||||| ||| || |||||||| | ||| Sbjct 180 TGGATCTTCGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGGCAATC 236 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | |||||| Sbjct 237 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 163 bits (180), Expect = 7e-35 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || ||||| || || | || || Sbjct 288 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 347 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || ||||| || ||||||||||||| || ||||||||| Sbjct 348 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 407 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| |||||||| ||||| ||||| ||| || |||||||| | ||| Sbjct 408 TGGATCTTCGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGGCAATC 464 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | |||||| Sbjct 465 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq4373 Length=891 Score = 163 bits (180), Expect = 7e-35 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||||||| || | || || Sbjct 661 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCC 720 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || ||||| || |||||||| |||| || ||||||||| Sbjct 721 TCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 780 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| |||||||| ||||| ||||| ||| || |||||||| | ||| Sbjct 781 TGGATCTTCGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGGCAATC 837 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | |||||| Sbjct 838 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 872 >seq587 Length=8987 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || || ||||| | || || Sbjct 1896 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCC 1837 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || || || ||||| || || | |||||||||||| Sbjct 1836 TCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 1777 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| | || |||||||| | ||| ||| Sbjct 1776 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTC 1717 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || ||||| ||||| || || | ||||||| Sbjct 1716 TTACCGGTGAGGGTCTTCACGAAAATCTGCATT 1684 >seq1880 Length=2433 Score = 159 bits (176), Expect = 8e-34 Identities = 165/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || ||||| || || | || || Sbjct 2218 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 2277 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || || || || ||||||||||||| || ||||||||| Sbjct 2278 TCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 2337 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| |||||||| ||||| ||||| ||| || |||||||| | ||| Sbjct 2338 TGGATCTTCGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGGCAATC 2394 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| || || | |||||| Sbjct 2395 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 158 bits (174), Expect = 3e-33 Identities = 164/214 (77%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || ||||| || || | || || Sbjct 619 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCC 678 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| ||||| || || || || ||||||||||||| || ||||||||| Sbjct 679 TCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 738 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| |||||||| ||||| ||||| ||| || |||||||| | ||| Sbjct 739 TGGATCTTCGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGGCAATC 795 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 ||||| || || || ||||| || || | ||||| Sbjct 796 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq5492 Length=529 Score = 136 bits (150), Expect = 9e-27 Identities = 140/183 (77%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 210933 ATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGT 210992 ||||| || |||||| |||| | || || || |||||||| || |||||||| || || Sbjct 529 ATGTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGC 470 Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052 || ||||| || || | |||||||||||||||||||| || ||||| ||||||||| Sbjct 469 TGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTG 410 Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 || | || |||||||| | ||| ||||| || ||||| ||||| || || | |||| Sbjct 409 TCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGC 350 Query 211113 ATT 211115 ||| Sbjct 349 ATT 347 >seq2443 Length=1860 Score = 109 bits (120), Expect = 1e-18 Identities = 156/218 (72%), Gaps = 9/218 (4%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || |||||||| | || | || ||||| || || ||| || Sbjct 1229 AGCACGAGGTGCAGCGTCGACTCTTTCTCGACGCCGTAGTCCGCGAGCGT---TCCCTCG 1285 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||| ||| |||||||| || || ||| |||| || ||| | | | Sbjct 1286 CCCAGCTGCTTGCCAAAGAAAATAAGGCGCTGCAAGTGAGGCGGAATGCCCTCCCTCTTC 1345 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||| ||||| ||||||| ||||| ||||| ||| || |||||||| ||| Sbjct 1346 TGGACCTTTTCCATCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGACAATC 1402 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| ||||| | |||||| || Sbjct 1403 GTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 1440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159068593217840