Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5243 102 2e-16 seq2033 102 2e-16 seq587 102 2e-16 seq1044 89.7 1e-12 >seq5243 Length=600 Score = 102 bits (112), Expect = 2e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || |||||||| ||||||||||| || || | || | || || Sbjct 558 GAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTC 499 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||||| | ||| |||||||| || Sbjct 498 CTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTC 439 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| |||| | | |||| ||| || || || | || || Sbjct 438 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGT 379 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| ||||||||||| | ||||||| Sbjct 378 CTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 345 >seq2033 Length=2245 Score = 102 bits (112), Expect = 2e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || |||||||| ||||||||||| || || | || | || || Sbjct 420 GAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTC 361 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||||| | ||| |||||||| || Sbjct 360 CTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTC 301 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| |||| | | |||| ||| || || || | || || Sbjct 300 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGT 241 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| ||||||||||| | ||||||| Sbjct 240 CTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 207 >seq587 Length=8987 Score = 102 bits (112), Expect = 2e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| ||||| | || | || || Sbjct 1897 GAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTC 1838 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||||| | ||| |||||||| || Sbjct 1837 CTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTC 1778 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| |||| | | |||| ||| || || || | || || Sbjct 1777 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGT 1718 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| ||||||||||| | ||||||| Sbjct 1717 CTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 1684 >seq1044 Length=4624 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||| ||||| || || | || | || || Sbjct 925 GAGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTC 866 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||||| | ||| |||||||| || Sbjct 865 CTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTC 806 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| |||| | | |||| ||| || || || | || || Sbjct 805 CTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGT 746 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| |||||||| || | ||||||| Sbjct 745 CTTACCGGTGAGGGTCTTCACAAAAATCTGCATT 712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153737776824336