Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq587 140 2e-28 seq1880 138 8e-28 seq4543 136 3e-27 seq5372 132 3e-26 seq5243 125 5e-24 seq4373 125 5e-24 seq2033 125 5e-24 seq1044 125 5e-24 seq3993 116 3e-21 seq5492 98.7 7e-16 >seq587 Length=8987 Score = 140 bits (154), Expect = 2e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 1894 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTC 1835 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 1834 CAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 1775 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||||||| || || ||||| | | || |||| Sbjct 1774 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 1716 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 1715 TACCGGTGAGGGTCTTCACGAAAATCTGCAT 1685 >seq1880 Length=2433 Score = 138 bits (152), Expect = 8e-28 Identities = 172/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 |||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| | Sbjct 2198 TCATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGT 2257 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| ||| | || ||||||||||| || || || || | ||||||||| || | Sbjct 2258 CCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAG 2317 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | Sbjct 2318 GAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCC 2376 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 2377 TCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 136 bits (150), Expect = 3e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 |||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| | Sbjct 599 TCATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGT 658 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | ||||| ||| | || ||||||||||| || || || || | ||||||||| || | Sbjct 659 CCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAG 718 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | Sbjct 719 GAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCC 777 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 |||||||| | | ||||||||| || || || |||||||||||||| |||| Sbjct 778 TCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq5372 Length=561 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 41 CATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 100 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 101 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 160 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 161 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 219 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 220 CCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 132 bits (146), Expect = 3e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 269 CATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 328 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 329 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 388 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 ||| | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 389 AGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 447 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 448 CCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq5243 Length=600 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| ||| || ||||||||||| || ||||| ||| | || || Sbjct 555 CACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTC 496 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 495 GAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 436 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||||||| || || ||||| | | || |||| Sbjct 435 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 377 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 376 TACCGGTGAGGGTCTTCACGAAAATCTGCAT 346 >seq4373 Length=891 Score = 125 bits (138), Expect = 5e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 |||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| | Sbjct 641 TCATACCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGT 700 Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225 | || || ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 701 CCGCAAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAG 760 Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGAT 44284 || | || ||||| ||| |||||| |||| | |||| | || |||||| | Sbjct 761 GGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCC 819 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | | ||||||||| || || || |||||||||||||| ||||| Sbjct 820 TCCACCTCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 872 >seq2033 Length=2245 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| ||| || ||||||||||| || ||||| ||| | || || Sbjct 417 CACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTC 358 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 357 GAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 298 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||||||| || || ||||| | | || |||| Sbjct 297 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 239 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||||||||| || ||||| Sbjct 238 TACCGGTGAGGGTCTTCACGAAAATCTGCAT 208 >seq1044 Length=4624 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || ||| |||||| ||||| ||||| || ||||| ||| | || || Sbjct 922 CACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCGAGGGTGCGGCCCTCCTC 863 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || ||||| | ||||||||| || | || | ||||||||| ||| Sbjct 862 CAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 803 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||||||| || || ||||| | | || |||| Sbjct 802 GATCTTGGCCTTGAC-GTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCT 744 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||||||||||||| || || ||||| Sbjct 743 TACCGGTGAGGGTCTTCACAAAAATCTGCAT 713 >seq3993 Length=1029 Score = 116 bits (128), Expect = 3e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 55 CATACCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 114 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 ||||| ||| | || ||||||||||| || || || || | |||||||| || | Sbjct 115 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGG 174 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || ||||| ||| |||||| |||| | |||| | || |||||| | | Sbjct 175 GGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTCTCGATCGTGTCGCTCGCCT 233 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| | | ||||||||| || || | |||||||| || || |||||| Sbjct 234 CCACCTCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATG 286 >seq5492 Length=529 Score = 98.7 bits (108), Expect = 7e-16 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 44156 ATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGC 44215 |||||||| || || | ||| | || || |||||||| || || ||||| | |||| Sbjct 529 ATGTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGC 470 Query 44216 TGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGT 44274 ||||| || | || | ||||||||| ||| ||||| ||| | |||| | ||||| Sbjct 469 TGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGAC-GTTCTCGATGGT 411 Query 44275 GTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTG 44334 |||| || || ||||| | | || ||||| || ||||||||||||||||| || || Sbjct 410 GTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTG 351 Query 44335 CAT 44337 ||| Sbjct 350 CAT 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359965760457072