Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5243 159 8e-34 seq2033 159 8e-34 seq587 156 1e-32 seq5492 143 6e-29 seq1044 141 2e-28 seq5372 125 2e-23 seq4543 125 2e-23 seq4373 125 2e-23 seq1880 125 2e-23 seq3993 122 2e-22 >seq5243 Length=600 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 349 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 409 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 468 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || || || || ||| || Sbjct 469 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAACATC 528 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || || || Sbjct 529 CAGAAAGAGTCCACCCTCCACCTCGT 554 >seq2033 Length=2245 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 211 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 270 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 271 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 330 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| || || | || || || || || ||| || Sbjct 331 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAACATC 390 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || || || Sbjct 391 CAGAAAGAGTCCACCCTCCACCTCGT 416 >seq587 Length=8987 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 1688 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 1747 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 1748 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 1807 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || || || | || || ||||| || ||| || Sbjct 1808 CGTCTCATCTTCGCTGGTAAGCAGCTGGAGGAGGGCCGCACCCTCGCCGACTACAACATC 1867 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1868 CAGAAGGAGTCCACCCTCCACCTCGT 1893 >seq5492 Length=529 Score = 143 bits (158), Expect = 6e-29 Identities = 138/177 (78%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 351 CAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 410 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 411 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 470 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || |||||||| || || |||||||| || || | || | ||| || || ||| Sbjct 471 CGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCCTGCGGACTACAAC 527 >seq1044 Length=4624 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 716 CAGATTTTTGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAGCGAC 775 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||| Sbjct 776 ACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 835 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || || || | || || || || || || || Sbjct 836 CGTCTCATCTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACCCTCGCGGACTACAATATC 895 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 896 CAGAAGGAGTCCACCCTCCACCTCGT 921 >seq5372 Length=561 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 268 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 212 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 211 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 152 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 151 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 92 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 91 ATCCAGAAGGAGTCGACGCTGCACCTCGT 63 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 496 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 440 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 439 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 380 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 379 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 320 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 319 ATCCAGAAGGAGTCGACGCTGCACCTCGT 291 >seq4543 Length=829 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 827 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 771 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 770 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 711 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 710 CAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 651 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 650 ATCCAGAAGGAGTCGACGCTGCACCTCGT 622 >seq4373 Length=891 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 869 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 813 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || || || |||||| Sbjct 812 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 753 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || ||||| || || ||| Sbjct 752 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACAAC 693 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 692 ATCCAGAAGGAGTCGACGCTGCACCTCGT 664 >seq1880 Length=2433 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || ||||| ||||||||||||| ||| Sbjct 2426 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 2370 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || ||||| |||||| Sbjct 2369 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 2310 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 2309 CAGCGTCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 2250 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 2249 ATCCAGAAGGAGTCGACGCTGCACCTCGT 2221 >seq3993 Length=1029 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || ||||| ||||| ||| | || || || ||||| ||||||||||||| ||| Sbjct 282 CAGATTTTTGTGAAGACTTTAACCGGCAAGACGATTGCCCTCGAGGTGGAGGCGAGC--- 226 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || || || || |||||| Sbjct 225 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAG 166 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || || ||||| || || ||||| || || || | || || || || || ||| Sbjct 165 CAGCGCCTCATTTTCGCTGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 106 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 105 ATCCAGAAGGAGTCGACGCTGCACCTCGT 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203644585521504