Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F000482225.1_202013-10-25] 5,616 sequences; 23,079,371 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3993 163 3e-35 seq5372 161 9e-35 seq4373 161 9e-35 seq1880 158 1e-33 seq4543 156 4e-33 seq587 134 1e-26 seq5243 131 2e-25 seq2033 131 2e-25 seq1044 125 7e-24 seq5492 98.7 9e-16 >seq3993 Length=1029 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| || || | ||| || |||||||| ||||||||| ||||| ||||| | | Sbjct 59 CCGCCGCGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 118 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || |||||||| ||||| | |||| Sbjct 119 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGA 178 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 179 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 238 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | | ||||| || || || | ||||| || |||||||||||||| Sbjct 239 TCGAGGGCAATCGTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 288 >seq5372 Length=561 Score = 161 bits (178), Expect = 9e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||| || |||||||| ||||||||| ||||| ||||| | | Sbjct 45 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 104 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 105 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 164 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 165 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 224 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | ||||| || || ||||||||||| ||||| |||||||| Sbjct 225 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 271 Score = 161 bits (178), Expect = 9e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||| || |||||||| ||||||||| ||||| ||||| | | Sbjct 273 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 332 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 333 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGAGGA 392 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 393 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 452 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | ||||| || || ||||||||||| ||||| |||||||| Sbjct 453 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 499 >seq4373 Length=891 Score = 161 bits (178), Expect = 9e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||| || |||||||| ||||||||| ||||| ||||| | Sbjct 646 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCA 705 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || |||||||| ||||| | |||| Sbjct 706 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGGCGCTGCTGGTCAGGGGGA 765 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 766 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 825 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | ||||| || || ||||||||||| ||||| |||||||| Sbjct 826 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 872 >seq1880 Length=2433 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||| || |||||||| ||||||||| ||||| ||||| | | Sbjct 2203 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 2262 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 2263 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 2322 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 2323 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2382 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | ||||| || || ||||||||||| ||||| |||||||| Sbjct 2383 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 2429 >seq4543 Length=829 Score = 156 bits (172), Expect = 4e-33 Identities = 170/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | ||| || |||||||| ||||||||| ||||| ||||| | | Sbjct 604 CCGCCACGCAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 663 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 664 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 723 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 724 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 783 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861 || | | ||||| || || ||||||||||| ||||| ||||||| Sbjct 784 TCGAGGGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCA 829 >seq587 Length=8987 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||| || || || ||| ||||||||| ||||| ||||||| | Sbjct 1911 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1852 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| || ||||| || || ||||| ||||||| ||| Sbjct 1851 AGGGTGCGGCCCTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 1792 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||| | | | |||||||| | ||| ||| Sbjct 1791 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 1732 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | || || ||||| || || ||||| |||||||||||||| Sbjct 1731 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 1685 >seq5243 Length=600 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||| || || || ||| ||| ||||| ||||| ||||| | | Sbjct 572 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 513 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| || ||||| || || ||||| ||||||| ||| Sbjct 512 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 453 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||| | | | |||||||| | ||| ||| Sbjct 452 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 393 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | || || ||||| || || ||||| |||||||||||||| Sbjct 392 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 346 >seq2033 Length=2245 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||| || || || ||| ||| ||||| ||||| ||||| | | Sbjct 434 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 375 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || ||||||||||| || ||||| || || ||||| ||||||| ||| Sbjct 374 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 315 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||| | | | |||||||| | ||| ||| Sbjct 314 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 255 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | || || ||||| || || ||||| |||||||||||||| Sbjct 254 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 208 >seq1044 Length=4624 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||| || || || ||| ||||||||| || || ||||| | | Sbjct 939 CCACCGCGCAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCG 880 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || || ||||| ||||||| ||| Sbjct 879 AGGGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 820 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||||||| ||| || ||| | | | |||||||| | ||| ||| Sbjct 819 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACC 760 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | | || || ||||| || || ||||| || ||||||||||| Sbjct 759 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACAAAAATCTGCAT 713 >seq5492 Length=529 Score = 98.7 bits (108), Expect = 9e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 41681 ATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGC 41740 ||||| ||||| | ||||||| | || ||||||||||| || ||||| || || ||| Sbjct 529 ATGTTGTAGTCCGCAGGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGC 470 Query 41741 TGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTG 41800 || ||||||| ||| | | ||||||||| ||| || ||| | | | ||| Sbjct 469 TGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTG 410 Query 41801 TCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGC 41860 ||||| | ||| ||||| | | || || ||||| || || ||||| |||||||||||| Sbjct 409 TCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGC 350 Query 41861 AT 41862 || Sbjct 349 AT 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462271546259200