Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq106 89.7 6e-13 >seq106 Length=352803 Score = 89.7 bits (98), Expect = 6e-13 Identities = 187/279 (67%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 187645 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 187586 Query 54061 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 187585 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 187526 Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180 |||| | | | || | |||||||| || | ||| | || | | || || || Sbjct 187525 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 187466 Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 187465 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 187406 Query 54241 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 54279 ||| ||||| | ||| || || |||| ||| || || || Sbjct 187405 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 187367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718572019840