Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq21 123 2e-23 seq106 113 4e-20 >seq21 Length=125516 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | | ||| | ||||| || |||||||| || |||||||| || Sbjct 54960 ACCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGC 55019 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||||||||| || |||||| |||||||||||||||| || || || Sbjct 55020 GAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 55079 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | |||| |||||| || |||||| Sbjct 55080 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGAC 55139 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || ||||| || || || || ||||||||||| Sbjct 55140 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 55187 >seq106 Length=352803 Score = 113 bits (124), Expect = 4e-20 Identities = 368/569 (65%), Gaps = 7/569 (1%) Strand=Plus/Minus Query 133782 TCGACGTCGACGCACTTGTTGACGGCAATACTGGCTAGATTACAAACGGCCGTCTCGTTC 133841 || |||||||| ||||| ||| ||| || ||| || || || ||||| ||||| | | Sbjct 187965 TCCACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCC 187906 Query 133842 TCGTCGCAATACTGGACGATCTCGGCGCAGAGGTTGCTGCATTTGATGGTGCCCAAAttt 133901 | | | |||| || ||||| | ||| || ||| ||| |||||||| |||||||| Sbjct 187905 TTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTC 187846 Query 133902 ttttGATTGCTAAAGTTATTGCAATGATCCTTGTATAGCATGTACGGCCCGCCGGTTTCG 133961 || |||||| || ||||| |||||||| |||||| | || ||||||| ||| Sbjct 187845 TTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCG 187786 Query 133962 ACGTTGGTCTCGACGATAAATCTAA--ACAAGTCTCTCGCCTTCACCTGCCTTTCGTACA 134019 | || | || ||| || || ||||||| |||| | | | | || || Sbjct 187785 GTCTGGGACATGAGGATC--TCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCA 187728 Query 134020 CTTGAGCATTTTCGTAGTCGCAATATCTCATTTCGAAATCAAAACCGTATTTGTCGGCGA 134079 | |||||||| || || || ||||| || ||||| |||| | Sbjct 187727 TTCCCTTCTTTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCA 187668 Query 134080 GGTCAGGGCATGTTTTGTGAGAGAATAGCGACCACATTTGATTGTTCTTTACGCGTTTCA 134139 || | | ||| ||| | | |||| |||| | | | ||| || || |||| Sbjct 187667 GGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCA 187608 Query 134140 TGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTTTAGTGTCTTCGGAGC 134199 |||| ||||| |||||||| ||| || | | |||||| || ||| || | Sbjct 187607 TGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTAC 187548 Query 134200 CCATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGATGCCACGGCTCGATGTAGG 134259 | |||| || ||| | || ||||| | | || | ||||||||||||| ||| Sbjct 187547 CGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACA 187488 Query 134260 CGGCGAGGGCACCTTTTCGCTTA---CCACCCTGGTCGACGTGACGCACCATGTTGTTGA 134316 |||||| |||||| || |||||| ||||||||||| |||| || | |||| |||| Sbjct 187487 CGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGA 187428 Query 134317 AGACTCTCAACATATTGACGAGACCGCTG 134345 | || | | ||| ||||||||| || Sbjct 187427 ACACACGGAGCATGGGCACGAGACCGTTG 187399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828242778336