Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq21 102 9e-17 >seq21 Length=125516 Score = 102 bits (112), Expect = 9e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || ||||| || || || || || | || || ||||||||||||||||| Sbjct 54996 CTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAA 55055 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | ||||||||| ||| || |||| | Sbjct 55056 GATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 55115 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||||| | || || |||| | |||||| || || || || ||||| || Sbjct 55116 CTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 55175 Query 43172 AAAGATTTGCATTTTT 43187 || || |||||| || Sbjct 55176 GAAAATCTGCATTCTT 55191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814683730240