Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq106 334 7e-87 seq21 84.2 2e-11 >seq106 Length=352803 Score = 334 bits (370), Expect = 7e-87 Identities = 613/885 (69%), Gaps = 20/885 (2%) Strand=Plus/Minus Query 23006 ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTG 23065 ||||||||| ||| |||||| ||||| || ||||| ||||| ||| || ||||| ||| Sbjct 187956 ACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTG 187897 Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125 ||||| | ||| || || || |||||| ||||| || || |||||||| |||| ||| Sbjct 187896 TACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTG 187837 Query 23126 CTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGAC 23185 ||| ||||| | |||||||| |||||| | || ||| |||||| ||| ||| Sbjct 187836 GATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGAC 187777 Query 23186 TCGATGATCGCTCGCCACATAGTC-TGAGCGTGAACACGTCGC-ACGTACCTGCC-TTCT 23242 || |||| | ||||| |||| || || ||| |||| ||| | | || |||| Sbjct 187776 ATGAGGATCTCAAACCACA-AGTCCTGCGCCGGAAT-CGTCTTGACGCCCATTCCCTTCT 187719 Query 23243 TCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGC 23302 | ||||||| | |||| | || || || | ||||| |||||| |||||| | Sbjct 187718 TT-TCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTG 187660 Query 23303 GATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGA 23362 | | || ||| || ||||| | || | | || || |||| || ||| Sbjct 187659 CACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGA 187600 Query 23363 TCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTC 23422 || || ||||| || ||||| ||||| |||||||| || ||||| || |||||||| Sbjct 187599 TCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTT 187540 Query 23423 TTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAAC 23482 |||| | || || |||||||| || ||||||||||||||||| ||||| || Sbjct 187539 CGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAG 187480 Query 23483 GCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTT 23542 || ||| | |||| ||| ||||| || ||||| ||||| ||||| ||| |||| | Sbjct 187479 GCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGG 187420 Query 23543 AGCATCGGCACGAGACCGTTGGACGCGCCG--CCTACGCCCGCCA---CACTCGAACCTT 23597 ||||| ||||||||||||||||| | ||| | || || || | ||| ||| Sbjct 187419 AGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTA--CCGGCGATGTAACT---ACCGG 187365 Query 23598 TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGC 23657 | || | ||||||||||||||| || || || ||| ||| || || | |||| Sbjct 187364 AAGAGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGC 187305 Query 23658 ATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAAC 23717 | | || || |||||||| ||||| ||||| ||||| || || | || || | ||| | Sbjct 187304 ACTCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGC 187245 Query 23718 ACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAA 23777 | ||| ||| || | || || ||| |||| |||||| || ||| ||||||| |||| Sbjct 187244 AGGAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAA 187185 Query 23778 AGTATCCATTCGACATTAGATTGTACGT--GTCGATGGCGGCATCAATGTCCTCTCCGTG 23835 || |||| ||||| |||| ||| || | ||| ||| || |||| | ||| || Sbjct 187184 AGAATCCCAAGGACATGAGATCGTAGGTGCGGCGAATGCG--CTCCATGTTGTTTCCATG 187127 Query 23836 TATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 ||||| || || || |||| ||||| | || |||||||| || Sbjct 187126 AATACCAATCGCCACACGCAATATCATTTGCTGGGGTCTCTCCAC 187082 >seq21 Length=125516 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 |||| ||||| |||||||| ||||| || || || || || ||| || |||| || || Sbjct 55193 TCAAGAATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAG 55134 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 | ||||| |||| | ||||| | || |||||||||||| | || || Sbjct 55133 GCCAGCGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCG 55074 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||||||||| || |||||||| || ||| | || || Sbjct 55073 GACCAGCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGA 55033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764126591360