Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq106 104 2e-17 >seq106 Length=352803 Score = 104 bits (114), Expect = 2e-17 Identities = 311/476 (65%), Gaps = 17/476 (4%) Strand=Plus/Minus Query 153919 CGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATCGG 153978 ||||||| |||||| | ||| | || | || | || || ||| || | ||| | Sbjct 187655 CGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAG 187596 Query 153979 GAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGT--GTCTTCGCTGCCAATGTTTCG 154036 ||| ||| ||||||| | ||| ||||| || ||| ||| || | || ||||||| Sbjct 187595 GAATCCAAAGGGCGTAAAACAGATCGCGGGCA--CGTTGGTCCTCCTTACCGGTGTTTCG 187538 Query 154037 ACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGC 154096 || | | | || || | | |||| |||||||| || | ||| || || || Sbjct 187537 CTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGC 187478 Query 154097 GCCTTTACGCTTGCCGCC---CTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAG 154153 || |||||||| ||||| ||| | |||| || | | || ||||| || || || Sbjct 187477 ACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAG 187418 Query 154154 CATGGGTAGCAGACCGCTGGCGGTACCGTTTGTA-----GATTTAATCTTGCTGTTGCGG 154208 |||||| | |||||| ||| ||||||||| ||| ||| ||| || | | | | Sbjct 187417 CATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAA-CTACCGGAAGAG- 187360 Query 154209 CCTCGAACGCTGTTTACGTTTAATCCAATACCGCCGCCGTGTTTGGAGATCATGGCGCAA 154268 || | | ||| |||| || |||||||| ||| | || ||| ||||||| Sbjct 187359 ---CGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCAC 187303 Query 154269 TCGTTCAATGTGTTATAGATACCACGAATGCTATCGCTTTCCATGGTCAATAGGAAACAT 154328 || || | |||| || || ||| || || ||| | ||||| || ||||| || Sbjct 187302 TCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAG 187243 Query 154329 GAACTCATCTGCGGAGTTGGAGTGCCGGCAGCAAACATGGTCGGGCTTGCGTGCGT 154384 ||||||||||| || | || || ||||| |||| ||| ||| | ||||| || Sbjct 187242 GAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGT 187187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061470073600