Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq106 210 2e-49 seq21 145 7e-30 >seq106 Length=352803 Score = 210 bits (232), Expect = 2e-49 Identities = 863/1346 (64%), Gaps = 30/1346 (2%) Strand=Plus/Minus Query 145052 TACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTG 145111 |||| || || ||| | ||||| ||| || ||||||||| | || | ||| |||||| Sbjct 188517 TACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTG 188458 Query 145112 AAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTAC 145171 ||||| || || ||||||| || ||||| || |||| ||| | |||||||||||| | Sbjct 188457 AAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGC 188398 Query 145172 GCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAA 145231 |||| | | || || |||| || | || | ||| | ||| || | | |||| Sbjct 188397 GCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAG 188338 Query 145232 TCCCATAG--CGAA-GTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG 145288 | ||| | || || ||| ||||| | |||| |||||| | ||||| | Sbjct 188337 TTCCAGCGGCCGCTCGTGGGCTGTTTCTCCCATAAGTCGAACTGCAGCTTCCCCTCCGAG 188278 Query 145289 GCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCC 145348 || |||||||| | |||| || ||| | ||||| || | | Sbjct 188277 GCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTCCGCGAGGTCCGTGGAGGAC 188218 Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCG 145408 |||| ||| || | || || |||||| || | | |||||| | ||| || ||| Sbjct 188217 TCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATTGAGCTTCTGCGCCTCCTCG 188158 Query 145409 CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCG 145468 ||| | | || | || || || | ||| |||||||| |||||||| | || | |||| Sbjct 188157 CTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCACGCCAAGGCCG 188098 Query 145469 ATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCG 145528 || || || || | ||||||| || | || | || | || || | | ||||| Sbjct 188097 ATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGGGGTAGTAACTGCGGTCA 188038 Query 145529 ATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCA 145588 || | |||| ||| | || |||| || | | | || ||| Sbjct 188037 ATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTCATAGAGGCGTTGGTGGTCG 187978 Query 145589 AAC-CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647 ||| | || || || ||| | ||| | | ||| |||||| || || | || || || Sbjct 187977 AACACCTGCTTC-TCCACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGAC 187919 Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGAT 145707 || ||||| || | | |||| | | ||||| | ||||| |||| || ||||| Sbjct 187918 GGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGAT 187859 Query 145708 GGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGG 145767 ||| |||| ||| | |||||| |||| ||||||| ||||||||||| |||||| | || Sbjct 187858 GGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGG 187799 Query 145768 TCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACC 145825 |||| ||||| ||| | | | ||| |||| |||||||||||| | | | Sbjct 187798 GACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCA--CAAGTCCTGCGCCGGAATC 187741 Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 || | |||| | |||||| | | ||| | ||| ||| | ||| Sbjct 187740 GTCTTGACGCCCATTCCCTTCTTTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCG 187681 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 ||||| ||| |||||| | ||| |||||| |||||||| ||| || | | Sbjct 187680 TAGCAGTCGCTCAGGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCC 187621 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCT--T 146003 ||||| |||| ||| || | ||| || | ||| || ||||| | || ||||| || | Sbjct 187620 TTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGT 187561 Query 146004 TGCAATCCTCAGCACCCATGTTTCGCTTCA-AATTAAGCACACTATAGATGTCCGCGTGC 146062 || ||||| ||| |||||||||||| | | || | | | | ||| |||||| Sbjct 187560 TGG--TCCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAACTCGA-ACACGTCGGCGTGC 187504 Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTCCACGTGA 146119 ||||| || | || ||||||| ||| || || || || ||||||||||||||||| Sbjct 187503 CACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAG 187444 Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179 || | |||| || || || || | ||||||| ||| ||| ||| ||||||||| Sbjct 187443 CGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTA 187384 Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACC----GCC 146235 | || | ||| ||||| | | ||||| | | || | ||| ||| Sbjct 187383 CCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCC 187324 Query 146236 GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 ||| |||| || | |||||| || ||| || ||||| ||||| || || || || Sbjct 187323 GCCTTACT----GATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATCGATACTGTC 187268 Query 146296 G--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353 | |||| ||| | | || ||||| || | |||||| | | |||| || || || | Sbjct 187267 GTCCTTC--ATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACCGGCGTTG 187210 Query 146354 AACAACGTCGGGCTCGCGTGCGTAAA 146379 |||| || ||| | ||||| ||||| Sbjct 187209 AACAGGGTAGGGGTGGCGTGGGTAAA 187184 >seq21 Length=125516 Score = 145 bits (160), Expect = 7e-30 Identities = 174/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 131001 CCATGAG-CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGT 131059 |||||| |||||||| | || ||||| | || | ||| ||||| || || ||||||| Sbjct 54953 CCATGACACCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGT 55012 Query 131060 AATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGT 131119 | || | |||||| ||||| |||||||| || ||| |||| | ||||||||||| Sbjct 55013 AGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGT 55072 Query 131120 CCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGG 131179 |||| ||||| ||||| ||||| ||| || ||||| | ||| | || ||| ||| Sbjct 55073 CCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGG 55132 Query 131180 ACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| |||| || | ||| |||||||| || || || |||||||||||||| Sbjct 55133 CCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCAT 55187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010392734720