Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq106 93.3 5e-14 >seq106 Length=352803 Score = 93.3 bits (102), Expect = 5e-14 Identities = 188/279 (67%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 63043 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63102 ||||| || ||||| ||| || ||||| || || ||||| |||||||||||||||||||| Sbjct 187645 CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAG 187586 Query 63103 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63162 || ||| ||||| | || | || ||||| || || || || || || || Sbjct 187585 GGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGAC 187526 Query 63163 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63222 |||| | | | || | |||||||| || | ||| | ||| | | || || || Sbjct 187525 GAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTT 187466 Query 63223 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63282 || ||||| || | ||| | ||||||||||| | || | | ||| || | | Sbjct 187465 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAG 187406 Query 63283 ACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCC 63321 ||| ||||| ||||| || || || | ||| || || || Sbjct 187405 ACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACC 187367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628768476800