Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq37 217 3e-51 seq21 176 8e-39 seq120 87.8 3e-12 >seq37 Length=265056 Score = 217 bits (240), Expect = 3e-51 Identities = 345/491 (70%), Gaps = 8/491 (2%) Strand=Plus/Minus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| | | ||| |||||| || || |||||||| || || | || ||| || Sbjct 164339 CCACATGCCGTAGACGTAGTCCTTGGCGTGACCCCAATCACGAAGGGCATTCACGTTACC 164280 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGC--GAGTGATTTTT 268375 ||||| ||| ||||||||||||| |||| | ||| || | |||| | ||||| ||| Sbjct 164279 GAGGAGCAGCTGTTTCTGCTTGCCGTGCTTAATGCGGGC--GGCCGCACGGGTGATCTTT 164222 Query 268376 CGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC 268435 | || ||||| |||| || || | ||| |||||||||||||| || ||||||||| Sbjct 164221 CTCGTGACGAAGGTCTGTCCTCGACGGGGGGATTCGTGGTTGAAGAGAATACCGTTGCAC 164162 Query 268436 GCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCA 268495 ||| ||||||| || | ||| ||||||||| || ||||| | || ||| ||| || Sbjct 164161 GCGTACATGCCGTAGGACTCGCGGTAGTTCTTCACTATCCAGAAGGCGTACAGCTTGGCG 164102 Query 268496 ACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACT 268555 || || || || || || | |||||| ||||| | || || || || | || Sbjct 164101 ACCGCATAAGGGCTGCGGGGGTAGAAGGGGGTCGTCTCCGACTGGGGAATCTCCTGCACG 164042 Query 268556 TTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAG 268615 ||| |||||||| ||| || || |||||||| || || || | |||||| Sbjct 164041 AGGCCGTAGAGCTCGCTGGTGGAGGCCTGGTAGAAGCGGCAGGTCTTCTCCAACCCGCAG 163982 Query 268616 ATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCAC--GTCCGCTGTATACT 268673 ||||| || ||||| | || || || || |||||||| ||||| |||| | Sbjct 163981 GAGCGGATCGCATCGAGGATCTTGAGCGTGCCGATACCATCCACTTGTCCGGTGTAG--T 163924 Query 268674 CCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCG 268733 | ||| ||||||| ||||||| || ||| ||||||| | ||||| || |||||||||| Sbjct 163923 CGGGCGTCTCGAAGGACACCTTCACGTGGGACTGGGCGGCGAGGTTGTACACCTCATCCG 163864 Query 268734 GTTTGACCTGC 268744 | || |||||| Sbjct 163863 GCTTCACCTGC 163853 >seq21 Length=125516 Score = 176 bits (194), Expect = 8e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | ||| || ||||||||||| |||||||| || || | | Sbjct 54961 CCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCG 55020 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || ||||| || || Sbjct 55021 AGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 55080 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || ||||||||||| || ||||| ||||||||| |||||||||||| ||| | || || Sbjct 55081 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGAC 55139 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || |||||| || || ||||||||||| ||||| ||||||||| Sbjct 55140 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 55188 >seq120 Length=362076 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 175053 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 174996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617699725760