Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq106 271 1e-67 >seq106 Length=352803 Score = 271 bits (300), Expect = 1e-67 Identities = 1084/1685 (64%), Gaps = 76/1685 (5%) Strand=Plus/Minus Query 243776 AGGTAGTACATGCCGGTCTTGAGTCCA--CTGGACCAGGCGTGGAGGTGCATGGCCGTCA 243833 |||||||||||||| ||||| |||||| ||| |||| ||||| |||||||| || | Sbjct 188814 AGGTAGTACATGCCCGTCTTCAGTCCAGACTG--CCAGCAGTGGAAGTGCATGGAGGTGA 188757 Query 243834 GCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCT 243893 | | | ||| || || ||| || ||||||| | |||||| || Sbjct 188756 -----TACGGCCGGAGGAGGGGCTC----TCG---AGGTAGAGGTTCATGGACTGCGACT 188709 Query 243894 GGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCAT 243953 |||| | | || || | |||||||| ||| || | ||| || ||||| Sbjct 188708 GGTCAATATACTTGGCGCGGGCCGCGGCCATATCGATCAGCTGACGCTGGGAGATCTCCC 188649 Query 243954 ACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGC-ACCGAG 244012 || | || ||||| ||||| || ||||||| || | | | || || ||| Sbjct 188648 ACACGGTGCGGTAGAGCTCCTTGATGTCGTCGGGGATACCCGCCACAC-CAGCGACGGAG 188590 Query 244013 CCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCA-- 244070 || ||| | ||||| | | | || || | ||||||||||||| ||||| | Sbjct 188589 CCGTTGAAGGTGATGATTTCGTTACGGATCTCATCGTTCCACAGGTT---GCGCTTGATG 188533 Query 244071 -GCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGG 244129 | || || || | | ||||||||||| | ||||| || |||||| || || | Sbjct 188532 AGGTCCATCACGAGATACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACG 188473 Query 244130 TAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTC 244189 || | ||| ||| ||||||| || ||| |||| ||||| ||||| | ||| Sbjct 188472 TAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAG 188413 Query 244190 GCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGT 244249 || || |||||||||| || || || ||| | || || | | | || || Sbjct 188412 GCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTC 188353 Query 244250 CTGAGCTCGTTCCAGTCCCACATGCC-CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTC 244308 |||| | | ||||| ||| ||| | | || | |||| |||| | ||| Sbjct 188352 TTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCT----GTTTCT---CCCATAAGTC 188300 Query 244309 AAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCG 244368 ||||||||| ||||| | | |||||||||| | ||||| |||||||| || Sbjct 188299 GAACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCAC 188240 Query 244369 CTGGGCCAGCT---TACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCAT 244425 || || || | | || ||| | ||||||||||||||||||||||||||| Sbjct 188239 CTCCGCGAGGTCCGTGGAGGACTCCACC---GCGGCGTAGTAGATGGTCTCGAAGATCTC 188183 Query 244426 CTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTC 244485 || || | | | |||| ||| |||||||||| | | | || ||| | || Sbjct 188182 CTCATTGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATC 188123 Query 244486 GGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGC--- 244542 ||| || ||||||||||| | |||||| || | ||| |||| |||| | | |||| Sbjct 188122 GGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGT 188063 Query 244543 TTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCG 244602 ||| ||||||||| | ||| ||| || || ||| |||||| || | | | | Sbjct 188062 TTC---CACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAA-CGTCCT 188007 Query 244603 -GACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCC 244661 | ||| || || | || |||| || | | ||| || ||| Sbjct 188006 TGGTGACCTCATAGAGGCGTTGGTGGTCGAACACCTGCTTCTCCACGTCGA--------- 187956 Query 244662 TCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGG 244721 |||||| | ||||||||| | ||| |||||||||||||| ||| ||| | || Sbjct 187955 ---CAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGG 187899 Query 244722 TGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGAT 244781 |||||| || |||||| ||||| || || |||||||||||| |||| | || |||| Sbjct 187898 TGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGAT 187839 Query 244782 TGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGG 244841 |||| || |||||||||||||||||| |||||||| || | ||||||||| ||||| Sbjct 187838 TGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGG 187779 Query 244842 CGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG-CGAGCCTTGCCCTCT 244900 | ||||| ||| | |||| ||| | |||| || || | || || ||| Sbjct 187778 ACATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCT 187719 Query 244901 GCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGG 244960 ||||| |||| ||||||||| ||| || ||| ||||| | | Sbjct 187718 -TTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTG 187660 Query 244961 CACGACG-CCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAG 245019 ||| ||| ||| ||| || |||||| || | |||||||| | || ||||||||| Sbjct 187659 CAC-ACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAG 187601 Query 245020 GTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTT 245079 || || ||||| ||||| | || || || | || | || || ||| || ||||| Sbjct 187600 ATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTT 187541 Query 245080 CTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAG 245139 | |||| | || || || |||||| ||||||| ||||| | ||| || |||| Sbjct 187540 TCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAA 187481 Query 245140 GGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGA 245195 ||| || ||||| ||| |||||||||| | | || ||| ||||| | Sbjct 187480 GGCACCCTTACGCTTACCGCCACCCTGGTCCA----CGTAGCGGGCGGTGTTATTGAACA 187425 Query 245196 TGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT 245255 || || | ||||| | ||||| ||| ||||| || || |||||| || Sbjct 187424 CACGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGG 187365 Query 245256 TGCCCCTGAGGTTGCTGA---TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGG 245312 | || |||| ||| ||| | || | || ||||| ||| |||| || Sbjct 187364 AAGAGCGGATGTTG-TGAACGTGG--AACCCAATACCACCGGCCGCCTTACTGATGGTGG 187308 Query 245313 CGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAA 245372 |||| ||||| |||||| ||||| || || ||||| ||||||| | || | Sbjct 187307 CGCACTCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGA 187248 Query 245373 AGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGG 245432 ||||||| || ||| ||||| ||| | | | ||||||||| || ||| ||||||||| Sbjct 187247 AGCAGGAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGG 187188 Query 245433 TAAAG 245437 ||||| Sbjct 187187 TAAAG 187183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334383870080