Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq106 248 1e-60 seq37 87.8 2e-12 >seq106 Length=352803 Score = 248 bits (274), Expect = 1e-60 Identities = 943/1462 (65%), Gaps = 26/1462 (2%) Strand=Plus/Minus Query 113880 TGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 113939 |||| ||| |||||||| ||| || || || |||||||| || || | | Sbjct 188534 TGAGGTCCATCACGAGATACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGA 188475 Query 113940 GATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGG 113999 || || || | |||| | ||||| |||||||| |||||||||| || || | ||||| Sbjct 188474 CGTAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGG 188415 Query 114000 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT 114059 |||| ||||||||||| |||| ||| ||| |||||| | ||||| ||| | | || | Sbjct 188414 AGGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCT 188355 Query 114060 CCTTGAGGGCGTCCCAGTCGTAGTTGA-GCT--TTGTCTCCCCCTGCCACATATCAAACT 114116 ||||||||| ||||||| || | ||| | | || || ||| | || |||| Sbjct 188354 TCTTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCTGTTTCTCCCATAAGTCGAACT 188295 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 | || | || | ||||| || |||| || ||||| || || ||||| ||||||| Sbjct 188294 GCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTCCG 188235 Query 114177 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA 114236 | | || | | | ||| | || |||| || || ||||| || || |||| | Sbjct 188234 CGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATTGA 188175 Query 114237 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGAC 114296 || ||||| ||| || | ||| ||| | |||||| |||| || || | Sbjct 188174 GCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCC 188115 Query 114297 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGG 114356 | || || || ||||| || ||||| || | | || | | || || ||||||| Sbjct 188114 CCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGG 188055 Query 114357 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 114416 | || || | | || || || | || || || | || || |||| |||| |||| Sbjct 188054 GGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTCAT 187995 Query 114417 GAAGCTTTTCGTAATCAAAA--CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474 || || || || || |||| |||| | | |||| |||| |||||||| Sbjct 187994 AGAGGCGTTGGTGGTCGAACACCTGCT--TCTCCACGTCGACAAACTTGCTGAGGGCGAT 187937 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 || || || || || || | |||||||||||| |||||||| ||||| ||||| || Sbjct 187936 GGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCA 187877 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 || ||| || | ||| ||||| ||||| ||||| ||||| || || |||| || || || Sbjct 187876 CAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTC 187817 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 114654 |||||| |||||| | || || ||||| || |||||| |||| || | ||| | Sbjct 187816 CTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCACAA 187757 Query 114655 ATCGGCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAG 114711 || | || | | | | | ||| | | | |||| || ||||||| ||| Sbjct 187756 GTC--CTGC-GCCGGAATCGTCTTGACGCCCATTCCCTTCTTTTCGTACTCCTCGTACTT 187700 Query 114712 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC-CTTATCTGGGCAGAAGA 114770 || ||||| || || | || || ||| |||| | | ||| | | Sbjct 187699 CCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCT-GTGCACACGTTGGGGTCCATCA 187641 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 | | ||| || || |||||| ||||||||||||||||| || || ||||| || || Sbjct 187640 GCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGT 187581 Query 114831 AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 114889 | || ||||| | | || | | || | | || || || | || | || Sbjct 187580 AAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTG-TTTCGCTTCAGGCGGACGAAC 187522 Query 114890 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 114946 || | | || ||||||||||| || |||||||| |||| | |||||||| || Sbjct 187521 TCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCG 187462 Query 114947 CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCA 115006 ||| |||||| || || | || ||| ||| || || || ||||| || | || ||| Sbjct 187461 CCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCG 187402 Query 115007 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCATGGATGT 115064 | || || || || ||| | | ||| | | | || | || | || Sbjct 187401 TTGGAGGTACCGTTCGT--ACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGT 187344 Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124 | | |||||||| || ||| ||| ||| ||||||||| |||| || |||| | Sbjct 187343 GGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAA 187284 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184 | || ||||| ||| |||| | || | ||||||||| ||| || ||| | | Sbjct 187283 TGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCG 187224 Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 115244 | ||||| |||||||| ||||| || || |||||| | || | || |||||| || Sbjct 187223 GGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGAT 187164 Query 115245 CGTAGGTCTCCAAGACGGCG-GGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 115303 ||||||| | || ||| |||| | || |||||||| |||| || |||| Sbjct 187163 CGTAGGT-GCGGCGAATGCGCTCCATGTTGTTTCCATGAATACCAATCGCCACACGCAAT 187105 Query 115304 AACATGTATTGGGGTGTTTCCA 115325 | ||| | |||||| | |||| Sbjct 187104 ATCATTTGCTGGGGTCTCTCCA 187083 >seq37 Length=265056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 8637 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTC 8696 ||| | |||||||| ||||| || ||||| || | | |||||| ||||||||||||| Sbjct 164121 TGGATAGTGAAGAACTACCGCGAGTCCTACGGCATGTACGCGTGCAACGGTATTCTCTTC 164180 Query 8697 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC 8747 |||||||| || |||||||| || | | ||||| || | ||||||||| Sbjct 164181 AACCACGAATCCCCCCGTCGAGGACAGACCTTCGTCACGAGAAAGATCACC 164231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350553496640