Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq106 174 2e-38 seq21 93.3 4e-14 >seq106 Length=352803 Score = 174 bits (192), Expect = 2e-38 Identities = 386/569 (68%), Gaps = 25/569 (4%) Strand=Plus/Minus Query 153596 GGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTC 153655 ||| || || || || || |||||||| ||||| || | | |||||| | ||||| Sbjct 187942 GGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTC 187883 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 | ||| || ||| ||| || ||| |||||||| | ||||||| ||| ||||| Sbjct 187882 CGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCA 187823 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAA 153772 ||||| ||| | |||||| | || ||||||||||| || | || ||| ||| Sbjct 187822 GGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAA 187763 Query 153773 CCTATGCAGGTCCTGCGCTCGCACCCGCT----GCCGATAGCGGCCCTCGCTCTCGTATC 153828 || || ||||||||| | | | || ||| || |||| | ||||| Sbjct 187762 CCA---CAAGTCCTGCGCCGGAATCGTCTTGACGCCCATT----CCCTTCTTTTCGTACT 187710 Query 153829 GCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACAC-TGATGC 153887 ||||||| ||||| ||||| ||||||||||||||| ||||| | ||| | || Sbjct 187709 CCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGG 187650 Query 153888 GGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACC 153947 || | |||||||| |||| | || | ||||| || |||||| ||||| || | | Sbjct 187649 GGTC-CATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATC 187591 Query 153948 CAGAGCGCGTACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCA 154005 || || ||||| | || |||| || | ||| |||||| || |||| || |||| Sbjct 187590 CAAAGGGCGTAAAACAGATCGCGGGCACGTTG--GTCCTCCTTACCGGTGTTTCGCTTCA 187533 Query 154006 GATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCT 154064 | || | || | | | | |||||||||||| || || | ||| ||||| | |||||| Sbjct 187532 GGCGGACGAACTCGA-ACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCC 187474 Query 154065 TTACGCTTTCCG---CCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATG 154121 |||||||| ||| ||||| || |||| ||| | | || ||||| || || | |||| Sbjct 187473 TTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATG 187414 Query 154122 GGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 || | || ||| | | ||| ||||| || Sbjct 187413 GGCACGAGACCGTTGGAGGTACCGTTCGT 187385 >seq21 Length=125516 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| | || || |||||||| || ||||| | Sbjct 54994 GACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCG 55053 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || |||||||| ||||| ||| || || | Sbjct 55054 AAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACG 55113 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||||| | | || ||||| || || || || Sbjct 55114 TTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTC 55173 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 55174 ACGAAAATCTGCAT 55187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259869061760