Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq106 232 8e-56 seq37 84.2 3e-11 >seq106 Length=352803 Score = 232 bits (256), Expect = 8e-56 Identities = 858/1327 (65%), Gaps = 28/1327 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||| | |||| | ||||| |||||||| |||||||||| || || | |||||| Sbjct 188472 TAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAG 188413 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| |||| ||| ||| ||| || | ||| | || | | || | | Sbjct 188412 GCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTC 188353 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGA-GCT--TTGTCTCCCCCTCCCACATATCAAACTGG 116079 |||||||| ||||||| || | ||| | | || |||||| | || ||||| Sbjct 188352 TTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCTGTTTCTCCCATAAGTCGAACTGC 188293 Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 || | || | || || || |||| || |||||||| || ||||| |||||||| Sbjct 188292 AGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTCCGCG 188233 Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 | || | | | ||| | || |||| || || ||||| || || |||| | Sbjct 188232 AGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATTGAGC 188173 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 || ||||| ||| || | ||||||| | |||||| |||| || || || Sbjct 188172 TTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCCCC 188113 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 || || || ||||| || ||||| || | | || | | || || |||||||| Sbjct 188112 TGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGGGG 188053 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 || || | | || || || | || || || | || || |||| |||| |||| Sbjct 188052 TAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTCATAG 187993 Query 116380 AGCTTTTCGTAATCAAAA--CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTG 116437 || || || || || |||| |||| | | |||| |||| |||||||| | Sbjct 187992 AGGCGTTGGTGGTCGAACACCTGCT--TCTCCACGTCGACAAACTTGCTGAGGGCGATGG 187935 Query 116438 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACA 116497 | || || || || || | |||||||||||| |||||||| ||||| ||||| |||| Sbjct 187934 AGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACA 187875 Query 116498 AATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 116557 ||| || | ||| ||||| ||||| ||||| ||||| || || |||| || || |||| Sbjct 187874 GATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCT 187815 Query 116558 TGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT 116617 |||| ||||| | || || ||||| || |||||| |||| || | ||| | | Sbjct 187814 TGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCACAAGT 187755 Query 116618 CGGCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGG 116674 | | || | | | | | ||| | | | |||| || ||||||| ||| Sbjct 187754 C--CTGC-GCCGGAATCGTCTTGACGCCCATTCCCTTCTTTTCGTACTCCTCGTACTTCC 187698 Query 116675 CCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGC-CTTATCTGGACAGAAGA 116731 ||| ||||| || || ||| | || || ||| |||| | | || | | Sbjct 187697 GCTCGAACTCCTCGCCGTAGCAGTCGCTCAG-GCC--TGTGCACACGTTGGGGTCCATCA 187641 Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791 | | ||| || || |||||| || |||||||||||||| || || ||||| || || Sbjct 187640 GCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGT 187581 Query 116792 AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 | || ||||| | | || | | || | | || || || | || | || Sbjct 187580 AAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTG-TTTCGCTTCAGGCGGACGAAC 187522 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGA 116907 || | | || ||||||||||| || |||||||| |||| | ||||| || || Sbjct 187521 TCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCG 187462 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 ||| |||||| || || | || || || || || || ||||| || | || ||| Sbjct 187461 CCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCG 187402 Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACT--TGTTGGCTCTGACATCGTGGATGT 117025 | || || || || ||| | | ||| | | | || | ||| | || Sbjct 187401 TTGGAGGTACCGTTCGT--ACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGT 187344 Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 | | |||||||| || ||| ||| ||| ||||||||| |||| || |||| | Sbjct 187343 GGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAA 187284 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | |||||||| ||| |||| | || | |||||||||| ||| || ||| | | Sbjct 187283 TGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCG 187224 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 117205 | ||||| |||||||| ||||| || || |||||| | || | || |||||| || Sbjct 187223 GGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGAT 187164 Query 117206 CGTAGGT 117212 ||||||| Sbjct 187163 CGTAGGT 187157 >seq37 Length=265056 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 10552 TGGCTCGTGAAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTC 10611 ||| | |||||||| || ||||| ||||| || | | | |||| ||||||||||||| Sbjct 164121 TGGATAGTGAAGAACTACCGCGAGTCCTACGGCATGTACGCGTGCAACGGTATTCTCTTC 164180 Query 10612 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC 10662 |||||||| || |||||||| || | | ||||| || | ||||||||| Sbjct 164181 AACCACGAATCCCCCCGTCGAGGACAGACCTTCGTCACGAGAAAGATCACC 164231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504071113280