Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq106 185 2e-41 >seq106 Length=352803 Score = 185 bits (204), Expect = 2e-41 Identities = 526/797 (66%), Gaps = 15/797 (2%) Strand=Plus/Minus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 ||||| | | ||| ||||| || ||||| ||| |||||| ||| |||| || ||| Sbjct 187944 AGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATC 187885 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 || || || || ||| |||||||||||| |||| | || ||||| || || ||| Sbjct 187884 TCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTG 187825 Query 221822 GCAGCGTCCTTGTAGAGCAT-AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTT 221880 ||||||||||| ||||| |||||||| ||| ||||| ||| | || || |||| Sbjct 187824 CAGGCGTCCTTGTACAGCATGAAAGGGAC-GCCGGTCTCGGTCTGGGACATGAGGATCTC 187766 Query 221881 GTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGT-CTTTTCATACC 221939 ||| | || ||| ||| | || ||||||| || | || | |||||| ||| Sbjct 187765 AAACCACAAGTC-CTG-CGC-CGGAATCGTCTTGAC-GCCCATTCCCTTCTTTTCGTACT 187710 Query 221940 CGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGG 221999 | || | || |||| || ||||| ||| |||||||| ||| | || Sbjct 187709 CCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGG 187650 Query 222000 GACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCC 222059 | |||||| |||| || | || ||||| | || ||||||||| || || |||| Sbjct 187649 GGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCC 187590 Query 222060 ACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 | || || | ||| ||||| | || || || |||||| ||| ||||| | |||| Sbjct 187589 AAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCAGGC 187530 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 | ||||| || | ||| |||||||||||||| || || ||||| | || || | Sbjct 187529 GGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTAC 187470 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTA 222239 |||| ||||||||| ||||| | | ||||| | || || | || | Sbjct 187469 GCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCA 187410 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT-- 222297 | || |||||||| |||||| || || ||||| |||| | | | ||| Sbjct 187409 CGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGT 187350 Query 222298 --ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 || | | || || ||||||||||| || ||| ||||||| |||||| Sbjct 187349 GAACGTGGA-AC---CCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGG 187294 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| ||||| || ||| ||| ||||| | | || || || || || |||| Sbjct 187293 GTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATC 187234 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475 |||| || | || || |||||| ||||| || || ||||||| |||||| | ||| Sbjct 187233 TGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAG 187174 Query 222476 GACATCAGATCGTACGT 222492 ||||| |||||||| || Sbjct 187173 GACATGAGATCGTAGGT 187157 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 221113 CTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAA 221172 |||||||||||| |||| || || ||||| | | ||| | ||| || ||||| Sbjct 188515 CTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAA 188456 Query 221173 CGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGC 221232 || |||| || ||||||||| ||||| ||||||| ||| ||||||||||||||| || Sbjct 188455 GGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGC 188396 Query 221233 CACCAGCAGACTGTTGCGCA 221252 || || || ||| |||| Sbjct 188395 CAGGAGGAGGGAGTTACGCA 188376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840062891520