Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq106 170 2e-37 seq37 87.8 2e-12 >seq106 Length=352803 Score = 170 bits (188), Expect = 2e-37 Identities = 464/709 (65%), Gaps = 11/709 (2%) Strand=Plus/Plus Query 75887 ATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAAC 75946 || |||| || ||||| ||||| || || | ||||| |||||||| || || ||| Sbjct 187769 ATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGCCTGCAAC 187828 Query 75947 AAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATT 76006 ||||| || || ||||||||||| || |||||| |||| ||||| |||||||| ||| Sbjct 187829 AAGAAATCCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCACGGAGATT 187888 Query 76007 TTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA 76066 | |||||||| ||||||||||| || || ||||| | || || |||||||| Sbjct 187889 ATCGAGTACACCTCCAAGGATGAGACCGCCGTCTGCAACCTCGCCTCCATCGCCCTCAGC 187948 Query 76067 AAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAG 76126 |||| |||| | | |||| | || || | || || |||| |||| ||| Sbjct 187949 AAGTTTGTCGACGTGGAGAAGCAGGTGTTCGACCACCAACGCCTCTATGAGGTCACCAAG 188008 Query 76127 ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCG 76186 ||||| | || || ||||| ||||||||| | | || || ||||| || ||||| Sbjct 188009 GACGTTACGTACAACCTGAACCGCGTCATTGACCGCAGTTACTACCCCGTGGAAACTGCC 188068 Query 76187 CGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTA 76246 | | || ||| ||| | || || || | || || || || || || |||| Sbjct 188069 AAGAGGAGCAACGAGCGCCACCGCCCGATCGGCCTTGGCGTGCAGGGGCTAGCCGATGCC 188128 Query 76247 TTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATC 76306 |||||| | ||| | | || || || || || || | |||| ||| Sbjct 188129 TTTATTCTCCTCCGTCTCCCCTTCACGAGCGAGGAGGCGCAGAAGCTCAATGAGGAGATC 188188 Query 76307 TTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGT 76366 || || ||||| || |||| | ||||| | || | || || | | ||| Sbjct 188189 TTCGAGACCATCTACTACGCCGCGGTGGAGTCCTCCACGGACCTCGCGGAGGTGGAGGGT 188248 Query 76367 TCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGG 76426 |||||||||| || |||| || || || | ||| ||| ||||| || | ||| Sbjct 188249 CCCTATGAGACCTTCAAGGGCAGCCCTGCCTCGGAGGGGAAGCTGCAGTTCGACTTATGG 188308 Query 76427 GAAGGTGAAAC------CAAGC-TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAA 76479 || ||||| | ||| | || ||||||||| |||||| | || ||| Sbjct 188309 GA----GAAACAGCCCACGAGCGGCCGCTGGAACTGGGATGCCCTCAAGAAGCGTGTCAT 188364 Query 76480 GGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACA 76539 ||||||||| | |||||| || | |||| || ||||| || ||||||||| | || Sbjct 188365 GGAGAAGGGGTTGCGTAACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCA 188424 Query 76540 AATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || ||||||| || || ||||| || || | ||| | ||||| ||| Sbjct 188425 GATTCTGGGTAACAACGAGTGCTTCGAGCCCTTCACGTCGAACATTTAC 188473 >seq37 Length=265056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 234/350 (67%), Gaps = 16/350 (5%) Strand=Plus/Minus Query 177565 AACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGT 177624 |||| | |||| |||| |||||| || || | || | ||||| | | || || Sbjct 164410 AACTCCTTCACGCTGTGTTGCTCCCCAGTGGCCAGGACCCAGTCATCCGGCGTGTCGTGC 164351 Query 177625 TGAAGCATGAGC---CACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCA 177681 || ||||||| |||||| | | || ||||||||||| |||||||| || | Sbjct 164350 TG---CATGAGCAACCACATGCCGTAGACGTAGTCCTTGGCGTGACCCCAATCACGAAGG 164294 Query 177682 GCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCA---CCTTTCACAATTTGTTTGACG 177738 || || | ||||||||| || | || | ||| || | | ||| | | | Sbjct 164293 GCATTCACGTTACCGAGG---AGCAGCTGTTTCTGCTTGCCGTGCTTAATGCGGGCGGCC 164237 Query 177739 CCATCAGTAATCTTCTTTGTGACAAAG-TCGGCACCTCGTCTCGGTGATTCGTGGTTGAA 177797 || || ||||| | ||||| ||| || | ||||| | || |||||||||||||| Sbjct 164236 GCACGGGTGATCTTTCTCGTGACGAAGGTCTGT-CCTCGACGGGGGGATTCGTGGTTGAA 164178 Query 177798 GAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTG 177857 ||| || ||| ||| || ||||| || ||||| || ||||| || || || | |||| Sbjct 164177 GAGAATACCGTTGCACGCGTACATGCCGTAGGACTCGCGGTAGTTCTTCACTATCCAGAA 164118 Query 177858 AGCGGCCAATTTGGAGACGCCATAGACGGAT-CGTGGGTAGAAGGGTGTC 177906 ||| || |||| ||| |||| | || | || ||||||||||| ||| Sbjct 164117 GGCGTACAGCTTGGCGACCGCATA-AGGGCTGCGGGGGTAGAAGGGGGTC 164069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566557495040