Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq247 226 4e-54 seq106 127 3e-24 >seq247 Length=361700 Score = 226 bits (250), Expect = 4e-54 Identities = 464/685 (68%), Gaps = 5/685 (1%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 ||||| ||||| || || || ||||| ||||| ||||| | | ||||| | || ||| Sbjct 170037 GGTATTGATTTGGGTACAACCTACTCTTGTGTGGGTGTGTTCAAGAATGACCAGGTGGAG 170096 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 |||||| | || ||||| || |||||||| || || || |||||||| || || ||| Sbjct 170097 ATTATCGCCAACGACCAGGGTAACCGTACGACCCCGTCCTACGTTGCTTTCACCGATTCG 170156 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || || ||||| || |||||||| || || || || |||||||| ||| || || Sbjct 170157 GAGCGCCTCGTCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAACACCATC 170216 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 ||||| || ||||| | ||||| ||||||| || | | || ||| || Sbjct 170217 TTTGATGCCAAGCGCATGATTGGCCGCAAGTACGACGACCCCGATCTGCAGTCCGACATG 170276 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 ||| ||||| | | | ||| || ||| || | ||||| || | || || Sbjct 170277 AAGCACTGGCCCT-TCAAG--GTCACCGTGAAGGACGGCAAGCCGGTGGTGGTAGTCGAG 170333 Query 195605 TTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAG 195664 | || || | | || | || || || || ||||| | |||||| ||| ||| Sbjct 170334 TACCAGGGCAACCACAAGGAGTTCTTCCCGGAGGAGATTTCCGCCATGGTGCTGAGCAAG 170393 Query 195665 ATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTA 195724 ||||||||| ||||| | | | ||| | || | | | || || | || || Sbjct 170394 ATGAAGGAGGTCGCGGAGGCCTACTGCGGTGAGACCATCACCAAGGCCGTCATCACCGTC 170453 Query 195725 CCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGT 195784 || || ||||||| || || || || |||||||| |||||||||| || ||||| || Sbjct 170454 CCCGCCTACTTCAACGACTCTCAGCGTCAGGCGACCAAGGACGCTGGCGCCATTGCCGGC 170513 Query 195785 CTA-AACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 | || || || | |||||||| || || || || || || ||||| || ||| | || Sbjct 170514 TTGGAAGTG-CTCCGTATTATCAACGAGCCTACTGCCGCCGCTATTGCCTACGGTATCGA 170572 Query 195844 CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGA 195903 |||||| | ||| || || ||||| | ||||| ||||||||||| |||||||| || Sbjct 170573 CAAGAAGACCAACGGCGAGAAGAATGTGCTCATCTTCGATCTCGGTGGCGGTACGTTCGA 170632 Query 195904 TGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATAC 195963 ||| | ||| | | || || | || || ||| | || ||||| || || ||||| || Sbjct 170633 TGTGACCCTTTTGACCATCGACGACGGCATCTTCAACGTGAAGGCGACCGCCGGTGACAC 170692 Query 195964 TCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| || ||||| || || ||| Sbjct 170693 CCATCTTGGCGGTGAGGACTTTGAT 170717 >seq106 Length=352803 Score = 127 bits (140), Expect = 3e-24 Identities = 224/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||| ||| || || ||| ||| || | | || || | || || ||||| Sbjct 228969 AAGATGAAGCAGATCGCCGAGACTTACATTGGCGAGAAGGTCAAGAACGCCGTGGTGACG 229028 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | ||||| ||| | || ||||| || | | | || || Sbjct 229029 GTCCCCGCCTACTTCAACGACGCGCAACGTCAGTCCACCAAGGATGCCGGTACGATCGCT 229088 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||| | ||| || | || ||||| || || || || ||||| | || ||||| ||| Sbjct 229089 GGTTTGAACGTGGTTCGTATCATCAACGAGCCCACCGCCGCTGCCCTCGCCTATGGCCTG 229148 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||||| | || || || | | |||| ||||||||||| |||||||| Sbjct 229149 ------AACAAGGTTGGTGAGAAGAACATTCTCGTCTTCGATCTCGGTGGCGGTACGTTC 229202 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || |||| ||||| || | | |||||||| ||| || |||||| Sbjct 229203 GATGTTTCCCTCCTCACCATTGACGGGGACTTCTTCGAAGTGGTGGCCACCAACGGTGAT 229262 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || ||||| || |||||||| || ||| Sbjct 229263 ACCCATCTTGGCGGTGAAGACTTTGAT 229289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859044901760