Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq106 152 6e-31 >seq106 Length=352803 Score = 152 bits (168), Expect = 6e-31 Identities = 224/317 (71%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| || || || ||||||||||||||||| |||||||| Sbjct 187456 CTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGA 187397 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| || || || | ||| |||| | ||| | ||||| || || || Sbjct 187396 GGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGTGGAACCC 187337 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||||| ||| |||| ||||||| ||||| |||||||| ||||| || Sbjct 187336 AATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATC 187277 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| |||| |||||||| ||||||| ||||| || | || || | || || || Sbjct 187276 GATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACC 187217 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||| || || || || || ||| || || | |||||| |||||||| Sbjct 187216 GGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGATCGTAGGT 187157 Query 1630365 GGCGAGCACGCGCGCCA 1630381 | | | | |||| ||| Sbjct 187156 GCGGCGAATGCGCTCCA 187140 Score = 125 bits (138), Expect = 9e-23 Identities = 363/553 (66%), Gaps = 18/553 (3%) Strand=Plus/Minus Query 1626985 TCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGTC 1627044 ||||||||||||| ||| ||||| || ||||| | |||||| || ||||||||||| ||| Sbjct 188856 TCGACGGTAAACTTGATCGCGTCCGCAGCGGGACGGGTGCGGAGGTAGTACATGCCCGTC 188797 Query 1627045 TTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTCG 1627104 || || || |||| || | |||||| || ||||| || ||| | | | Sbjct 188796 TTCAGTCCAGACTGCCAGCAGTGGAAGTGCATGGAGGTGATACGGCCGGAGGAGGGGCTC 188737 Query 1627105 GCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCATG 1627164 || ||| ||||| | ||||| |||||| | ||| ||||| | || ||||| Sbjct 188736 TCGAGGTAGAGGTTCATGGACTGCGACTGGTCAATATACTTGGCGCGGGCCGCGGCCATA 188677 Query 1627165 TCGAT--GGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCG- 1627221 ||||| | ||| || | || | |||||||||||| | ||| |||||| |||| Sbjct 188676 TCGATCAGCTGA--CGCTGGGAGATCTCCCACACGGTGCGGTAGAGCTCCTTGATGTCGT 188619 Query 1627222 -GGCGGCACCTCGTCGTCGCCAAAGCCCTGC-ACCGAGCCGTGCGCCGCGACGAGCCTGT 1627279 || | ||| ||||| | || || || ||||||| | || || || Sbjct 188618 CGGGGATACC-------CGCCACA--CCAGCGACGGAGCCGTTGAAGGTGATGATTTCGT 188568 Query 1627280 CGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGA 1627339 || | || |||||||| |||| || ||| | | || || | ||| | Sbjct 188567 TACGGATCTCATCGTTCCACAGGTTGCGCTTGATGAGGTCCATCACGAGATACTTGTTCA 188508 Query 1627340 CCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGC 1627399 |||| | || || || ||||| || || ||| ||||| |||| | |||| Sbjct 188507 CCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGGCTCGA 188448 Query 1627400 ACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGA 1627459 | |||| |||| ||||| ||||| || || | ||| ||||||||| |||||| ||||| Sbjct 188447 AGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAGGAGGA 188388 Query 1627460 GCGAGTTGCGCAGGCCGTGCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGCGGC 1627519 | ||||| |||| || | || || || || || ||||||| |||||||| Sbjct 188387 GGGAGTTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCAGCGGC 188328 Query 1627520 CGCTCTCGTGGGC 1627532 || ||||||||| Sbjct 188327 CG--CTCGTGGGC 188317 Score = 91.5 bits (100), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| ||||| ||| |||| || |||||||| || ||||| || || | |||||||| Sbjct 187609 CATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTT 187550 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||| ||| || ||| || | |||| | |||||||||||||||||| ||||| Sbjct 187549 ACCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTA 187490 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 ||| ||||| ||||| ||||| ||||| || Sbjct 187489 CACGGCGAAGGCACCCTTACGCTTACCGCCACC 187457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107105717609336