Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq106 125 6e-24 >seq106 Length=352803 Score = 125 bits (138), Expect = 6e-24 Identities = 752/1197 (63%), Gaps = 35/1197 (3%) Strand=Plus/Minus Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 || |||||||| |||| || |||||| | ||| | | ||||| |||| | ||| Sbjct 188562 ATCTCATCGTTCCACAGGTTGCGCTTGATGAGGTCCATCACGAGATACTTGTTCACCACC 188503 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 | || |||||| || || ||||| ||||||||||| ||||| ||||| || | Sbjct 188502 GGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGGCTCGAAGCAC 188443 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 |||||||| ||||||||||||| |||| ||||| |||||| ||||| | || || Sbjct 188442 TCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAGGAGGAGGGAG 188383 Query 138631 TTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC-- 138688 || || || || | | ||| || | |||||| | ||||| ||| ||| Sbjct 188382 TTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCAGCGGCCGCTC 188323 Query 138689 -TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCG 138747 | || | ||| | ||| | ||| |||| | | | ||| || || ||||| | | Sbjct 188322 GTGGGCTGTTTCTCCCATAAGTCGAACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTG 188263 Query 138748 TACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAG 138807 | | || || ||| | | | ||| | || || | ||| | ||| | ||| Sbjct 188262 AAGGTCTCATAGGGACCCTCCACCTCCGCGAGGTCCGTGGAGGACTCCACCGCGGCGTAG 188203 Query 138808 TAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATG 138867 || || || ||| |||| || ||||||| | ||||| ||||| | | || | Sbjct 188202 TAGATGGTCTCGAAGATCTCCTCATTGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGA 188143 Query 138868 CGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGC 138927 ||||| | | || || ||||| ||||| |||||||| | |||| ||||| |||||| Sbjct 188142 CGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGC 188083 Query 138928 AGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987 || | || || | ||| | || || || | || |||| ||| | Sbjct 188082 TCGTTGCTCCTCTTGGCAGTTTCCACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGG 188023 Query 138988 TTTCGCACG--ACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGT 139045 || | ||| || |||| || | | | |||| ||| | | || | Sbjct 188022 TT--GTACGTAACGTCCTTGGTGACCTCATAGAGGCGTTGGTGGTCGAA----CACCTGC 187969 Query 139046 TGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCA 139105 | || | ||||||||||| ||| ||| || ||||| | |||||| || || Sbjct 187968 T-TC----TCCACGTCGACAAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGG 187914 Query 139106 CTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTAC 139165 || || | | |||| |||| ||| || | |||| ||| |||||||| |||| Sbjct 187913 TCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTAC 187854 Query 139166 CTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGC 139225 | ||||| | |||||| ||| ||| || || || ||||| ||||| | || || Sbjct 187853 CCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGC 187794 Query 139226 CAGTTTCCACTTGTGTCTCTATAATGAATTTGA---ACAAGTCCCTAGCTTGTAT----T 139278 | || || || | | || | || | | |||||||| || | || | Sbjct 187793 CGGTCTCGGTCTGGGAC---ATGAGGATCTCAAACCACAAGTCCTGCGCCGGAATCGTCT 187737 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCG-TCGAATCGTTCACC 139337 |||||| | | ||| | ||||||| ||||| | || ||||| || || Sbjct 187736 TGACGCCCATTCCCTTCTT----TTCGTACTCCTCGTA-CTTCCGCTCGAACTCCTCGCC 187682 Query 139338 GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGC 139397 |||| ||| || | ||| || || ||| |||| ||| || | | | Sbjct 187681 GTAGCAGTCGCTCAGGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTC 187622 Query 139398 CTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457 |||||| ||| ||||||| ||||| |||||||| | ||| | | || |||||| || Sbjct 187621 CTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACG 187562 Query 139458 CTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCA 139517 | || ||| ||| |||| || |||| | | ||| || || ||||| |||||||| Sbjct 187561 TTGGTCCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCA 187502 Query 139518 TGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTT---GCCACCTTGATCGACGTGTCG 139574 || || || || | ||| | || || || || || |||||| || || |||| || Sbjct 187501 CGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCG 187442 Query 139575 TACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631 | | |||||||| || || | ||| ||| | |||||| | | || ||||| || Sbjct 187441 GGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGT 187385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895305522240