Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq106 116 6e-20 >seq106 Length=352803 Score = 116 bits (128), Expect = 6e-20 Identities = 184/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || ||||| || |||| || || || |||||||||||||| || |||||||| Sbjct 187456 CTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGA 187397 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| || || || | ||| || || | ||| | ||||| || || || Sbjct 187396 GGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGTGGAACCC 187337 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||||||||| |||| ||||||| || || || ||||| ||||| || Sbjct 187336 AATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATC 187277 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| |||| |||||||| ||| || ||||| || | || || || || || Sbjct 187276 GATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACC 187217 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGC 2073803 ||| ||||| || || || || || Sbjct 187216 GGCGTTGAACAGGGTAGGGGTGGC 187193 Score = 109 bits (120), Expect = 9e-18 Identities = 360/550 (65%), Gaps = 26/550 (5%) Strand=Plus/Minus Query 2069254 TCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTC 2069313 ||||||||||||| ||| |||| || || || |||||||| || ||||||||||| ||| Sbjct 188856 TCGACGGTAAACTTGATCGCGTCCGCAGCGGGACGGGTGCGGAGGTAGTACATGCCCGTC 188797 Query 2069314 TTGAGGCCGCGAC-GCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGAC 2069372 || || || ||| |||| || | |||||| || ||||| |||| || Sbjct 188796 TTCAGTCCA-GACTGCCAGCAGTGGAAGTGCATGGAGGTGATA----CGGCCGGAGGAGG 188742 Query 2069373 GGCACA----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCG 2069428 ||| | ||||||||| | ||||| |||||| | ||| |||||| | || | Sbjct 188741 GGCTCTCGAGGTAGAGGTTCATGGACTGCGACTGGTCAATATACTTGGCGCGGGCCGCGG 188682 Query 2069429 CCATGTCGAT--GGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAG 2069486 |||| ||||| | | |||| | ||| | |||||||||||| | | || |||||| Sbjct 188681 CCATATCGATCAGCTGACGCTG--GGAGATCTCCCACACGGTGCGGTAGAGCTCCTTGAT 188624 Query 2069487 ATG--CGGCGGCACCTCGTCGTCATCAAAGCCCTGC-ACCGAGCCCTGCGCTGCGATGAG 2069543 | ||| | ||| || || || || || || ||||| | | ||||| Sbjct 188623 GTCGTCGGGGATACC----CGCCA-CA----CCAGCGACGGAGCCGTTGAAGGTGATGAT 188573 Query 2069544 GCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCG 2069603 || || | || |||||||| |||| || | | | || || | Sbjct 188572 TTCGTTACGGATCTCATCGTTCCACAGGTTGCGCTTGATGAGGTCCATCACGAGATACTT 188513 Query 2069604 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGAC 2069663 ||| ||||| | || || || ||||| || || ||| ||||| ||||| | Sbjct 188512 GTTCACCACCGGGAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGG 188453 Query 2069664 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 2069723 |||| | |||| |||| ||||| ||||| || || | ||| ||||||||| |||||| Sbjct 188452 CTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAG 188393 Query 2069724 GAGCAGCGAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCA 2069783 ||| || ||||| |||| || | || || || | ||||| ||||||| ||| Sbjct 188392 GAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCA 188333 Query 2069784 GCGGCCGCTC 2069793 |||||||||| Sbjct 188332 GCGGCCGCTC 188323 Score = 96.9 bits (106), Expect = 5e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| ||||||| |||||||| || || | |||||||| ||| ||| |||| Sbjct 187592 TCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTTCA 187533 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 || || | |||| | |||||||||||||||||| ||||| ||| ||||| |||| Sbjct 187532 GGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCT 187473 Query 2071997 TGCGCTTGCCGCCGCC 2072012 | ||||| ||||| || Sbjct 187472 TACGCTTACCGCCACC 187457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916202999179112