Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq106 304 1e-77 seq21 145 7e-30 >seq106 Length=352803 Score = 304 bits (336), Expect = 1e-77 Identities = 968/1483 (65%), Gaps = 50/1483 (3%) Strand=Plus/Minus Query 148224 AGGTTGAGCTCGATCAGGTC-ATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGC 148282 |||||| ||| ||| ||||| ||| | ||||||| ||||||||| | ||||| ||| Sbjct 188547 AGGTTGCGCTTGATGAGGTCCATC-ACGAGATACTTGTTCACCACCGGGAACTCACCGCT 188489 Query 148283 GAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAA 148342 ||||| || || | || | ||| ||| || || || || |||||||||| |||| Sbjct 188488 CAGCACACGACGGACGTAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAG 188429 Query 148343 AATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCG 148402 |||||| | ||| | || ||||||||| ||| | || || ||||| ||||| || Sbjct 188428 AATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCC-- 188371 Query 148403 ATTTTTTATTTTGCGCTTC---AGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTT 148459 || | || |||||| || || |||||| |||| | | || ||| ||| Sbjct 188370 -TTCTCCATGACACGCTTCTTGAGGGCATCCCAGTTCCAGCG-GCCGCTCGTGGGCTGTT 188313 Query 148460 ----CCACATGTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTG 148514 ||| | |||| ||||||| | || | | || | |||||||||| | | | Sbjct 188312 TCTCCCATAAGTCGAACTGCAGCTTCCC-CTCCGAGGCAGGGCTGCCCTTGAAGGTCTCA 188254 Query 148515 TACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTC 148574 || || || | | || |||| || || | | ||| | |||| ||||||| || ||| Sbjct 188253 TAGGGACCCTCCACCTCCGCGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTC 188194 Query 148575 TCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGC 148634 ||| || | | |||||| | |||| |||||| | | || | ||| || | Sbjct 188193 TCGAAGATCTCCTCATTGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGA 188134 Query 148635 ACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAG 148694 | ||| || ||||| || ||||| ||||| | ||| || || ||||| |||| Sbjct 188133 ATAAAGGCATCGGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTC 188074 Query 148695 AGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACC 148754 || | || | || |||| ||||||| |||| || || ||| | Sbjct 188073 CTCTTGGCAGTTTCCACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTA 188014 Query 148755 ACCACCTTTGTAAT-TCTGCGCAGCAAT-----TCAAAATCGTACTTGTCATCTACGATG 148808 || |||| || | || | || | || || | | ||| || | ||| Sbjct 188013 ACGTCCTTGGTGACCTCATAGAGGCGTTGGTGGTCGAACACCTGCTTCTCCACGTCGACA 187954 Query 148809 CATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTAC 148868 | | | | |||||| ||||| || ||||| ||||| ||||||||| || | ||||| Sbjct 187953 AACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTAC 187894 Query 148869 TCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTC 148928 || | ||||| | |||||||||| ||| ||||| |||| ||||| |||||| Sbjct 187893 TCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGAT 187834 Query 148929 TTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCC 148988 || ||||||| |||||||||||||||||| | || |||| || || ||| | Sbjct 187833 TTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATG 187774 Query 148989 ACTATG--AACCGATGCAGGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCC 149042 | || || | | || ||||||||| | | |||| || | | |||| | Sbjct 187773 AGGATCTCAAACCA--CAAGTCCTGCGCCGGAATCGTCTTGACGCCCATT----CCCTTC 187720 Query 149043 TGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGG 149102 | ||||| ||| |||||||||| ||||||||||||| ||| || || | | Sbjct 187719 TTTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTG 187660 Query 149103 CACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGA 149162 ||| || ||| ||| |||| |||| || ||| | | || |||||||| || ||| Sbjct 187659 CACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGA 187600 Query 149163 TCGGGCACCCAGAGCGCGTACATGAGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGT 149220 || || | ||| || ||||| | || |||| || | ||| ||| || || ||| Sbjct 187599 TCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTG--GTCCTCCTTACCGGTGT 187542 Query 149221 TGCGGCGCAGGTTGA-GCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCG 149279 | || |||| || | || | ||| | ||| |||||||||||||| | |||||| ||| Sbjct 187541 TTCGCTTCAGGCGGACGAACTC-GAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCG 187483 Query 149280 AGCGCGCCCTTGCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACT 149336 | || ||||| ||||| ||| |||||||| |||| ||| | |||| || ||||| Sbjct 187482 AAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACA 187423 Query 149337 CGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGC 149396 || | ||| || | | || ||| || ||||| ||| | ||| ||| ||| Sbjct 187422 CGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAA 187363 Query 149397 GCTCGCACTTTGTGCACGTTGACGCCGATGCC----GCCGCCGTACTTTGAGATGGCCGC 149452 | || | ||||| |||| || || || || |||||| |||| ||||| || Sbjct 187362 GAGCGGATGTTGTGAACGTGGAACCCAATACCACCGGCCGCCTTACT----GATGGTGGC 187307 Query 149453 GCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAA 149512 ||| || ||| || ||| ||||| ||||| |||||| |||||||| || || || Sbjct 187306 GCACTCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAA 187247 Query 149513 GCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT 149572 ||| || | ||| || || | || ||||| ||||| ||| ||| ||||||| || Sbjct 187246 GCAGGAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGT 187187 Query 149573 AAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATG 149632 ||| || | | ||| | ||||| | | | | ||| ||||||| | ||||| Sbjct 187186 AAAGAATCCCAAGGACATGAGATCGTAGGTGCGGCGAATGCGCTCCATGTTGTTTCCATG 187127 Query 149633 GATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCC 149675 || || || || || |||| | ||| ||||| |||| |||| Sbjct 187126 AATACCAATCGCCACACGCAATATCATTTGCTGGGGTCTCTCC 187084 >seq21 Length=125516 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||||||| || ||||| || | | ||| |||||||||||||| || Sbjct 54990 GGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACC 55049 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| || ||||| ||||||||||| |||||| ||| Sbjct 55050 AGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTT 55109 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | |||||| ||| ||| || |||| || || ||| || ||||| || || Sbjct 55110 GACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGT 55169 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 55170 CTTCACGAAAATCTGCAT 55187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418334553920