Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq106 194 2e-44 >seq106 Length=352803 Score = 194 bits (214), Expect = 2e-44 Identities = 659/1008 (65%), Gaps = 43/1008 (4%) Strand=Plus/Minus Query 147234 CGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGAT 147293 ||| || |||||| | | || | ||| || || | |||||||||||| | ||||| | Sbjct 188167 CGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCAC 188108 Query 147294 ACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTG 147353 || | |||||| || || || |||||||| | ||| || | | | ||| |||| Sbjct 188107 GCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGGGGTAGTA 188048 Query 147354 GTTGCGATCAATAATCTTGTTGAGGTT--ACGCACTACAACTTTAGTTATTGTTTTGAGT 147411 |||| ||||| | ||| ||||| ||| | || | || || | | ||| Sbjct 188047 ACTGCGGTCAATGACGCGGTTCAGGTTGTACGTA--ACGTCCTTGGTGACCTCATAGAGG 187990 Query 147412 TTCTCGAAATCATAAGTCCCGTCTTCGACACGT--ACGCATTGGTTCACGGCGATAGACG 147469 | | || || || | |||| ||||| || | | | | | |||||| || | Sbjct 187989 CGTTGGTGGTCG-AACACCTG-CTTCTCCACGTCGACAAACTTGCTGAGGGCGATGGAGG 187932 Query 147470 CCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGT 147529 | || ||||||||||| ||||| || | | |||||| | || || | |||||| | Sbjct 187931 CGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGAT 187872 Query 147530 TGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGA 147589 || ||| || ||| |||||||| | ||||||| |||| ||||| ||||| ||| Sbjct 187871 TGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGT 187812 Query 147590 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGT 147646 | |||||| | || ||||||||||| || | | ||| ||||| || || Sbjct 187811 ACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCA---CAAGT 187755 Query 147647 CCTGCGCTCGCACCCGCT----GCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAAC 147702 ||||||| | | | || ||| || |||| ||||||||| ||||||| | Sbjct 187754 CCTGCGCCGGAATCGTCTTGACGCCCATT----CCCTTCTTTTCGTACTCCTCGTACTTC 187699 Query 147703 CGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACT-GATGCGGACACATCAG 147761 ||||| ||||| ||||||||||| ||| ||||| | ||| | || || | |||||| Sbjct 187698 CGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCTGTGCACACGTTGGGGTC-CATCAG 187640 Query 147762 CGACCACATGTCG-TCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGT 147820 || |||| |||| ||| | || || || ||| || ||||| || | ||| || |||| Sbjct 187639 CGTCCAC-TGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGT 187581 Query 147821 ACATAAGATCGCGCGCT--TTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAA-GCA 147877 | | |||||||| || ||| ||||| || |||| || |||| | | | Sbjct 187580 AAAACAGATCGCGGGCACGTTGG--TCCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAA 187523 Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTTC 147937 | | | | | |||||||||||| || || | ||| ||||| | ||||| |||||||| | Sbjct 187522 CTCGA-ACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTAC 187464 Query 147938 CG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994 || |||||||| || | ||| | |||| || ||||| || | |||||| | || | Sbjct 187463 CGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGAC 187404 Query 147995 CGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGT 148054 || | | || ||||| || ||| | || ||| | || | | ||| |||| Sbjct 187403 CGTTGGAGGTACCGTTCGTACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGT 187344 Query 148055 TAACGCCAATGCC----GCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTG 148110 | ||||| || |||||| |||| |||| ||||| || | || | Sbjct 187343 GGAACCCAATACCACCGGCCGCCTTACT----GATGGTGGCGCACTCCTTGAGGGTGTCG 187288 Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGA 148170 || ||||| ||||| ||||||| || | | | | | || || |||| ||| || || Sbjct 187287 TAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGC 187228 Query 148171 ATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAAT 148218 || | || || || ||| ||||| || | ||||| ||||| ||| Sbjct 187227 TTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAAT 187180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608769282880