Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq106 125 1e-22 >seq106 Length=352803 Score = 125 bits (138), Expect = 1e-22 Identities = 218/317 (69%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 259866 TGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGC 259925 |||||| | | | | ||||||||| |||||| | || || ||| || || | Sbjct 187140 TGGAGCGCATTCGCCGCACCTACGATCTCATGTCCTTGGGATTCTTTACCCACGCCACCC 187199 Query 259926 CCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACA 259985 | || || || || ||||| || ||| || |||| || ||||| || ||| || Sbjct 187200 CTACCCTGTTCAACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTCGTGGCCA 187259 Query 259986 TGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCA 260045 |||||| ||| ||||| ||||| || ||||| |||||| ||||||| |||| | Sbjct 187260 TGAAGGACGACAGTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACCATCAGTA 187319 Query 260046 AGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGG 260105 |||||||||| || || || || || ||||| | ||| | | || ||| | | Sbjct 187320 AGGCGGCCGGTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGTTACATCG 187379 Query 260106 CGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGG 260165 | || || ||||| |||||||| || ||||||||||| || || || || |||| | Sbjct 187380 CCGGTACGAACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCG 187439 Query 260166 CGCGCTACGTCGACCAG 260182 | |||||||| |||||| Sbjct 187440 CCCGCTACGTGGACCAG 187456 Score = 113 bits (124), Expect = 6e-19 Identities = 359/547 (66%), Gaps = 20/547 (4%) Strand=Plus/Plus Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGG--GCGTCGGTTCGACAGCATGGCCTGCGCA 262927 |||||||||||| ||||||| || || | |||| | || | | || |||| | Sbjct 188324 AGCGGCCGCTGGAACTGGGATGCCCTCAAGAAGCGTGTCATGGAGA--AGGGGTTGCGTA 188381 Query 262928 ACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCG 262987 |||| | ||| |||||| ||||||||| ||| | || || ||||| ||||| |||| || Sbjct 188382 ACTCCCTCCTCCTGGCGCCCATGCCCACCGCCTCCACCTCTCAGATTCTGGGTAACAACG 188441 Query 262988 AGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTA 263047 || |||||| | ||||| ||||| ||| || || ||||| || || || Sbjct 188442 AGTGCTTCGAGCCCTTCACGTCGAACATTTACGTCCGTCGTGTGCTGAGCGGTGAGTTCC 188501 Query 263048 CCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACT 263107 | ||||| ||| | || || | | | | | |||| |||||||| || Sbjct 188502 CGGTGGTGAACAAGTATCTCGTGATGGACCTCATCAAGCGCAACCTGTGGAACGATGAGA 188561 Query 263108 TTCGCGACCGGCTCATTGCGGCACAGGGCTCGGT-GCAGGGCTTTGACGACGAGGAGGTG 263166 | || || |||| | | ||||| || || || | || || ||| Sbjct 188562 TCCGTAACGAAATCATCACCTTCAACGGCTCCGTCGCTGG--TGTGGCG-------GGTA 188612 Query 263167 CCGCC--CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCA 263224 | || ||| |||||| |||| | |||||||||||| | || | || | | Sbjct 188613 TCCCCGACGACATCAAGGAGCTCTACCGCACCGTGTGGGAGATCTCCCAGCGTCAGCTGA 188672 Query 263225 TTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACC 263284 | |||||||| || | |||||| ||| | |||||| ||||| | ||||| |||| Sbjct 188673 TCGATATGGCCGCGGCCCGCGCCAAGTATATTGACCAGTCGCAGTCCATGAACCTCTACC 188732 Query 263285 TCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTA-TGCGTGGC-GTCGCGG 263342 ||| ||| | ||| | ||||| || |||||| | | ||| |||| ||| || Sbjct 188733 TCGAGAGCCCCTCCTCCGGCCGTATCACCTCCATGCACTTCCACTGC-TGGCAGTCT-GG 188790 Query 263343 CCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCAC 263402 || ||||| ||||||||||| || |||||||| |||||||| |||| || | || || Sbjct 188791 ACTGAAGACGGGCATGTACTACCTCCGCACCCGTCCCGCTGCGGACGCGATCAAGTTTAC 188850 Query 263403 CGTCGAT 263409 ||||||| Sbjct 188851 CGTCGAT 188857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177771847650096