Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq21 107 2e-18 seq106 87.8 2e-12 >seq21 Length=125516 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| || || || ||||||||||| | | |||| | Sbjct 54970 AGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTGCGG 55029 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| || || || || || | ||||||||| || || || || ||||| Sbjct 55030 CCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCC 55089 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | |||||| | || || ||||| | Sbjct 55090 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGGGCG 55149 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| |||||||| | || || |||||||| |||||| Sbjct 55150 ATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 55188 >seq106 Length=352803 Score = 87.8 bits (96), Expect = 2e-12 Identities = 365/566 (64%), Gaps = 19/566 (3%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | ||||| |||||| | || ||||| || | |||| || ||| || Sbjct 187094 CAGCAAATGATATTGCGTGTGGCGATTGGTATTCATGGAAACAACATGGAG--CGCATTC 187151 Query 7624 GAA--ACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTG 7681 | || ||| | | ||||| ||| | ||||| ||||| | || ||| |||| Sbjct 187152 GCCGCACCTACGATCTCATGTCCTTGGGATTCTTTACCCACGCCACCCCTACCCTGTTCA 187211 Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741 ||| || || |||||| || || || || | | ||||| || |||| Sbjct 187212 ACGCCGGTACCCCGAAGCCTCAGATGAGTTCCTGCTTCCTCGTGGCCATGAAGGACGACA 187271 Query 7742 GCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCA--AATACGGC-G 7798 | ||||| ||||||||| |||| || || ||||||| || || || |||| | Sbjct 187272 GTATCGATGGCATTTACGACACCCTCAAGGAGTGCGCCACCAT---CAGTAAGGCGGCCG 187328 Query 7799 GCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCA 7858 | || || || | |||| || || | ||| | |||||| ||||| || | Sbjct 187329 GTGGTATTGGGTTCCACGTTCACAACATCCGCTCTTCCGGTAGTTACATCGCCGGTACGA 187388 Query 7859 ACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATG 7918 |||| | ||| |||| | | ||||||| | || |||||||||||| | | || | | Sbjct 187389 ACGGTACCTCCAACGGTCTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACG 187448 Query 7919 TAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACG 7975 | |||||| || || ||||| || || ||| ||| | || | ||||||||||||| Sbjct 187449 TGGACCAGGGTGGCGGTAAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACG 187508 Query 7976 CGGACATTTACGCAGTGC-TAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAA--AG 8032 | ||| | | || ||| | | ||| || |||| ||| || ||| ||| | Sbjct 187509 CCGACGTGTTCG-AGTTCGTCCGCCTGAAGCGAAACACCGGTAAGGAGGAC--CAACGTG 187565 Query 8033 CGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCG 8092 | |||||||| || | || | ||| | || ||||| || |||| ||| || | | Sbjct 187566 CCCGCGATCTGTTTTACGCCCTTTGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGG 187625 Query 8093 ACGCACAATGGTCGCTCATGTGCCCC 8118 | | ||| ||| |||| ||| |||| Sbjct 187626 AGGGACAGTGGACGCTGATGGACCCC 187651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395822468160