Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq106 167 3e-36 seq83 91.5 2e-13 >seq106 Length=352803 Score = 167 bits (184), Expect = 3e-36 Identities = 463/709 (65%), Gaps = 11/709 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | ||| | || || ||||| || || ||||||| || || | |||||| Sbjct 188473 GTAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGGA 188414 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||| || ||||| || |||| | || |||||| | ||||||||| ||| || | Sbjct 188413 GGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCTT 188354 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGA-GCTTG------GTTTCACCTTCCCACATGTCAA 110879 |||||| ||||||||| || | ||| | ||||| ||||| | ||| | Sbjct 188353 CTTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCTGTTTC----TCCCATAAGTCGA 188298 Query 110880 ACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939 |||| ||| ||| | || || || |||| ||||| ||||||| ||| | | | Sbjct 188297 ACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCT 188238 Query 110940 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999 | || | || | | ||||| | |||| || ||||| || ||||| ||| Sbjct 188237 CCGCGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCAT 188178 Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 | | || || || || || || | | ||| | |||||| |||| || | Sbjct 188177 TGAGCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTA 188118 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 | || || || || | || || || | ||| ||| || | | ||||| || | Sbjct 188117 GCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCA 188058 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 |||| || || | | ||||||||| ||||| || || | ||||| ||| |||| | Sbjct 188057 CGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCT 187998 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 111239 ||| || || | || || | |||| | | |||| |||| ||||||| Sbjct 187997 CATAGAGGCGTTGGTGGTCGAACACCTGCTTCTCCACGTCGACAAACTTGCTGAGGGCGA 187938 Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299 | || || | ||||| || || ||||||||||| |||||||| | ||| || || | Sbjct 187937 TGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGC 187878 Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359 | | ||||| | ||| || || ||||||||||| || || ||||||||||| || | Sbjct 187877 ACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGT 187818 Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||||||| |||||| | || || ||||| ||||| || |||| || Sbjct 187817 CCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGAT 187769 >seq83 Length=551510 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 145282 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 145341 |||| |||||||||||||| ||||||| ||| | ||| ||| ||||||||||||| |||| Sbjct 138862 GCTCCTATAGTGTAGTGGTTATCACTTCGGATTCTGATTCCGACAACCCTGGTTCGAATC 138921 Query 145342 CAGGTAGGAG 145351 |||||||||| Sbjct 138922 CAGGTAGGAG 138931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028797036800