Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq106 244 1e-59 seq37 84.2 3e-11 >seq106 Length=352803 Score = 244 bits (270), Expect = 1e-59 Identities = 942/1462 (64%), Gaps = 26/1462 (2%) Strand=Plus/Minus Query 118120 TGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 118179 |||| ||| |||||||| ||| || || || |||||||| || || | | Sbjct 188534 TGAGGTCCATCACGAGATACTTGTTCACCACCGGGAACTCACCGCTCAGCACACGACGGA 188475 Query 118180 GATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 118239 || || || | |||| | ||||| |||||||| |||||||||| || || | |||| Sbjct 188474 CGTAAATGTTCGACGTGAAGGGCTCGAAGCACTCGTTGTTACCCAGAATCTGAGAGGTGG 188415 Query 118240 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTT 118299 |||| ||||||||||| |||| ||| ||| |||||| | ||||| ||| | | || | Sbjct 188414 AGGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTTACGCAACCCCTTCTCCATGACACGCT 188355 Query 118300 CCTTGAGAGCGTCCCAGTCGTAGTTGA-GCT--TTGTCTCCCCCTGCCACATATCAAACT 118356 |||||| || ||||||| || | ||| | | || || ||| | || |||| Sbjct 188354 TCTTGAGGGCATCCCAGTTCCAGCGGCCGCTCGTGGGCTGTTTCTCCCATAAGTCGAACT 188295 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | || | || | || || || |||| || |||||||| || ||||| ||||||| Sbjct 188294 GCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTGAAGGTCTCATAGGGACCCTCCACCTCCG 188235 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 | | || | | | ||| | || |||| || || || || || || |||| | Sbjct 188234 CGAGGTCCGTGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATCTCCTCATTGA 188175 Query 118477 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGAC 118536 || ||||| ||| || | ||| ||| | |||||| |||| || || | Sbjct 188174 GCTTCTGCGCCTCCTCGCTCGTGAAGGGGAGACGGAGGAGAATAAAGGCATCGGCTAGCC 188115 Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGG 118596 | || || || ||||| || ||||| || | | || | || || || ||||||| Sbjct 188114 CCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGG 188055 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 | || || | | || || || | || || || | || || |||| |||| |||| Sbjct 188054 GGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCCTTGGTGACCTCAT 187995 Query 118657 GAAGCTTTTCGTAATCAAAA--CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 || || || || || |||| |||| | | |||| |||| |||||||| Sbjct 187994 AGAGGCGTTGGTGGTCGAACACCTGCT--TCTCCACGTCGACAAACTTGCTGAGGGCGAT 187937 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || || || || || || | |||||||||||| |||||||| ||||| |||||||| Sbjct 187936 GGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTACTCGATAATCTCCGTGCA 187877 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 || || || | ||| ||||| ||||| ||||| ||||| || || |||| || || || Sbjct 187876 CAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTCTTGTTGCAGGCGTC 187817 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 |||||| |||||| | || || ||||| || |||||| |||| || | ||| | Sbjct 187816 CTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGGATCTCAAACCACAA 187757 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAG 118951 || | || | | | | | ||| | | | |||| | ||||||| ||| Sbjct 187756 GTC--CTGC-GCCGGAATCGTCTTGACGCCCATTCCCTTCTTTTCGTACTCCTCGTACTT 187700 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC-CTTATCTGGGCAGAAGA 119010 || ||||| || || | || || ||| |||| | | ||| | | Sbjct 187699 CCGCTCGAACTCCTCGCCGTAGCAGTCGCTCAGGCCT-GTGCACACGTTGGGGTCCATCA 187641 Query 119011 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070 | | ||| || || |||||| || |||||||||||||| || || ||||| || || Sbjct 187640 GCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGGAATCCAAAGGGCGT 187581 Query 119071 AGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 119129 | || ||||| | | || | | || | | || || || | || | || Sbjct 187580 AAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTG-TTTCGCTTCAGGCGGACGAAC 187522 Query 119130 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 119186 || | | || ||||||||||| || |||||||| |||| | |||||||| || Sbjct 187521 TCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACCCTTACGCTTACCG 187462 Query 119187 CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCA 119246 ||| |||||| || || | || ||| || || ||||| ||||| || | || ||| Sbjct 187461 CCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCATGGGCACGAGACCG 187402 Query 119247 TCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTG--GCTCTGACATCGTGGATGT 119304 | ||| || || || ||| | | ||| | | | || | ||| | || Sbjct 187401 TTGGAGGTACCGTTCGT--ACCGGCGATGTAACTACCGGAAGAGCGGATGTTGTGAACGT 187344 Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364 | | |||||||| || ||| ||| ||| ||||||||| |||| || |||| | Sbjct 187343 GGAACCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAA 187284 Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGG 119424 | |||||||| ||| |||| | || | |||||||||| ||| |||||| | | Sbjct 187283 TGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGAACTCATCTGAGGCTTCG 187224 Query 119425 GTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGT 119484 | ||||| |||||||| || || || || |||||| | || | || |||||| | Sbjct 187223 GGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAATCCCAAGGACATGAGAT 187164 Query 119485 CGTAGGTCTCCAAGACGGCG-GGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 119543 ||||||| | || ||| |||| | || |||||||| |||| || |||| Sbjct 187163 CGTAGGT-GCGGCGAATGCGCTCCATGTTGTTTCCATGAATACCAATCGCCACACGCAAT 187105 Query 119544 AACATGTATTGGGGTGTTTCCA 119565 | ||| | |||||| | |||| Sbjct 187104 ATCATTTGCTGGGGTCTCTCCA 187083 >seq37 Length=265056 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 11913 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTC 11972 ||| | |||||||| ||||| || ||||| || | | |||||| |||||||||||| Sbjct 164121 TGGATAGTGAAGAACTACCGCGAGTCCTACGGCATGTACGCGTGCAACGGTATTCTCTTC 164180 Query 11973 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC 12023 |||||||| || |||||||| || | | ||||| || | ||||||||| Sbjct 164181 AACCACGAATCCCCCCGTCGAGGACAGACCTTCGTCACGAGAAAGATCACC 164231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432045980480