Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq21 96.9 1e-14 >seq21 Length=125516 Score = 96.9 bits (106), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| || | | || || || || || || |||||||| || || || || || | Sbjct 54960 ACCACCGCGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGC 55019 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || || || || ||||| ||||| ||||| ||||| || || || Sbjct 55020 GAGGGTGCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 55079 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT-TCAA 140688 || ||||| || ||||| || || || || || || || || | || | ||| || | Sbjct 55080 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTC-GCTGGCCTCGA 55138 Query 140689 CTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || | | ||||| ||||| || || || || |||||||||||| Sbjct 55139 CCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 55188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246479007624