Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq106 378 8e-100 >seq106 Length=352803 Score = 378 bits (418), Expect = 8e-100 Identities = 899/1337 (67%), Gaps = 49/1337 (4%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 |||||| ||| ||| || || | ||| ||||| | |||| | |||||||| ||| Sbjct 188500 GAACTCACCGCTCAGCACACGACGGACGTAAATGTTCGACGTGAAGGGCTCGAAGCACTC 188441 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 |||||| |||| ||||| | ||| |||||||| |||||||| || | || || || || Sbjct 188440 GTTGTTACCCAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGCGCCAGGAGGAGGGAGTT 188381 Query 78627 CCGAAGACCATGCGTCTTGATCTCGAC-CTTTAGGCCGTCCCAAAATTCATTCGCCGCGA 78685 || | || | | | ||| | || ||| ||| | ||||| | || ||||| Sbjct 188380 ACGCAACCCCTTCTCCATGA-CACGCTTCTTGAGGGCATCCCAGT-TCCAGCGGCCGCTC 188323 Query 78686 ----------TCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTG 78735 || |||| | ||| || || | ||||| || || || |||||| Sbjct 188322 GTGGGCTGTTTCTCCCATAAGTCGAACTGCAGCTTCCCCTCCGAGGCAGGGCTGCCCTTG 188263 Query 78736 AACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC---GCATGACTCGAGCAGGGCCGCG 78792 || ||||| || | |||||| ||| ||||| || | | ||||| | | || ||| Sbjct 188262 AAGGTCTCATAGGGACCCTCCACCTCCGCGAGGTCCGTGGAGGACTCCACC---GCGGCG 188206 Query 78793 TGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCT--TGGTCTCGTCGAACG 78850 | ||| | | ||||||||| ||| ||||||| |||||| | | ||||| ||| | Sbjct 188205 TAGTAGATGGTCTCGAAGATCTCCTCATTGAGCTTCTGCGCCTCCTCG-CTCGT-GAAGG 188148 Query 78851 AAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGT 78910 || | ||| | || ||| ||||||| || ||||| ||||| | ||||||| |||| Sbjct 188147 GGAGACGGAGGAGAATAAAGGCATCGGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGT 188088 Query 78911 GGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGT 78970 ||||| ||||||| | ||| | || ||||| | | || || |||||||||| Sbjct 188087 GGCGCTCGTTGCTCCTCTTGGCAGTTTCCACGGGGTAGTAACTGCGGTCAATGACGCGGT 188028 Query 78971 TCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAAT--TTGGCGAAATCAAAA---TG 79025 ||||||| ||| ||| || || ||||| || | |||| | || || || Sbjct 188027 TCAGGTTGTACGTAACGTCCTTGGTGACCTCATAGAGGCGTTGGTGG--TCGAACACCTG 187970 Query 79026 ATT-TCCT--TTGATGAAAGTCGGT-AGGCACAGCGATGCCAGGTTGCACACGGCCGTCT 79081 || ||| | || ||| | | | ||| | || || |||||||| ||||| |||| Sbjct 187969 CTTCTCCACGTCGAC-AAACTTGCTGAGGGCGATGGAGGCGAGGTTGCAGACGGCGGTCT 187911 Query 79082 CGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGA 79141 | ||| | | |||||| || || ||||||| ||| || |||||||||| || | Sbjct 187910 CATCCTTGGAGGTGTACTCGATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCA 187851 Query 79142 TGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGG 79201 |||||||| ||| |||| ||| |||||||||||||| |||| | || |||| Sbjct 187850 AATTCTTCTGATTGGATTTCTTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGG 187791 Query 79202 TCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGT 79261 |||| ||| | |||| | | ||| | |||| | ||| | || | ||||| Sbjct 187790 TCTCGGTCTGGGACATGAGGATCTCAAACCACAAGTCCTGCGCCGG---AATCGTCTTGA 187734 Query 79262 A-CCGA--CCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACAT 79318 || | |||| ||||| | |||| | | ||| |||| || ||| | Sbjct 187733 CGCCCATTCCCTTCTTTTCGTACTCCTCGTACTTCCGCTCGAACTCCTCGCCGTAGCAGT 187674 Query 79319 CGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGT---CCTCGTCCTTCTCAA 79375 || |||||| | |||| ||| ||| |||||| ||| | |||| ||||| || Sbjct 187673 CGCTCAGGCCTGTGCACACGTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACAC 187614 Query 79376 CCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCT 79435 |||| |||||||| || || ||||| ||||| || || |||||| ||| | Sbjct 187613 GCTTC---ATGAAGAGATCAGGAATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGT 187557 Query 79436 CCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCT 79495 |||| | || ||| | ||| || || || | | ||||||||||||||||| Sbjct 187556 CCTCCTTACCGGTGTTTCGCTTCAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCT 187497 Query 79496 CCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCG 79555 | || || | |||||| | |||||| ||||| ||||| ||||||| ||||| ||||| | Sbjct 187496 CGAGGTACACGGCGAAGGCACCCTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGG 187437 Query 79556 TGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGA 79615 |||| ||||| || |||||||||||||||| |||| || | |||||||| ||| || Sbjct 187436 TGTTATTGAACACACGGAGCATGGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGA 187377 Query 79616 TTCGTGTACCGCTCGCCCGAATGTT-CGAGCAGTGGATTCCGATGCCCCCGGACCACTTG 79674 | ||||| | || ||||| || | ||||| || || || |||| | ||| Sbjct 187376 TGTAACTACCGGAAGAGCGGATGTTGTGAAC-GTGGAACCCAATACCACCGGCCGCCTTA 187318 Query 79675 GAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATA 79734 |||| |||||||||||||| || ||||| ||||| ||||| |||||||||||| Sbjct 187317 CTGATGGTGGCGCACTCCTTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATG 187258 Query 79735 GCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGC 79794 || || ||||||||| |||||| || || |||||||||||||| ||||| || Sbjct 187257 GCCACGAGGAAGCAGGAACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGG 187198 Query 79795 GTCGCGTGCGTGAAGAA 79811 || ||||| || ||||| Sbjct 187197 GTGGCGTGGGTAAAGAA 187181 Score = 354 bits (392), Expect = 9e-93 Identities = 1140/1741 (65%), Gaps = 66/1741 (4%) Strand=Plus/Plus Query 19119 TGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGACC 19178 |||| || ||| | || || ||||| || || | ||| | ||| || ||||| | Sbjct 187107 TGCGTGTGGCGATTGGTATTCATGGAAACAACATGGAGCGCATTCGCCGCACCTACGATC 187166 Query 19179 TGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACA 19238 | ||| | | ||||| || ||||| || || ||||| |||||||||||||| | Sbjct 187167 TCATGTCCTTGGGATTCTTTACCCACGCCACCCCTACCCTGTTCAACGCCGGTACCCCGA 187226 Query 19239 ACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCT 19298 | || |||||| ||| ||||| ||||| |||||||| ||||| || || ||||| | Sbjct 187227 AGCCTCAGATGAGTTCCTGCTTCCTCGTGGCCATGAAGGACGACAGTATCGATGGCATTT 187286 Query 19299 ACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACT 19358 |||| || |||||||||||||| |||| ||| | |||| ||||| ||| ||||| Sbjct 187287 ACGACACCCTCAAGGAGTGCGCCACCATCAGTAAGGCGGCCGGTGGTATTGGGTTCCAC- 187345 Query 19359 GCTC-GAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGT 19417 | || || ||||| || |||| ||| || |||||||| || ||||| Sbjct 187346 GTTCACAACATCCGCTCTTCCGGTAGTTACATCGCCGGTACGAACGGTACCTCCAACGGT 187405 Query 19418 ATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGC 19477 |||| || |||||||| || ||||| ||||| ||| | ||||| ||||||| ||||| Sbjct 187406 CTCGTGCCCATGCTCCGTGTGTTCAATAACACCGCCCGCTACGTGGACCAGGGTGGCGGT 187465 Query 19478 AAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTC 19537 || || ||||| | |||||| | ||||||||||| |||||||| ||||| | || ||| Sbjct 187466 AAGCGTAAGGGTGCCTTCGCCGTGTACCTCGAGCCGTGGCACGCCGACGTGTTCGAGTTC 187525 Query 19538 CTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCT-CTTCACGGC 19596 || ||| | ||| ||| | ||||| || ||||| || || ||| | Sbjct 187526 GTCCGCCTGAAGCGAAACACCGGTAAGGAGGACCAACGTGCCCGCGATCTGTTTTACGCC 187585 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGAT 19656 ||| |||||||| || || |||||| || || || |||| | | | ||| ||||| Sbjct 187586 CTT-TGGATTCCTGATCTCTTCATGAAGCGTGTCAAGGAGGAGGGACAGTGGACGCTGAT 187644 Query 19657 GTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTA 19716 | ||| ||| ||| | ||||| |||| ||||||||||| |||| | | ||| Sbjct 187645 GGACCCCAACGTGTGCACAGGCCTGAGCGACTGCTACGGCGAGGAGTTCGAGCGGAAGTA 187704 Query 19717 CCGGACTTACGTAGCCCAGGG---CCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTG 19773 | | |||| | |||| | |||||| | | ||| ||| | |||| | || Sbjct 187705 CGAGGAGTACGAAAAGAAGGGAATGGGCGTCAAGACGAT--TCC-GGCGCAGGACTTGTG 187761 Query 19774 GGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | |||||| |||| |||||||||| || | |||| ||||||||||| Sbjct 187762 GTTTGAGATCCTCATGTCCCAGACCGAGACCGGCGTCCCTTTCATGCTGTACAAGGACGC 187821 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 | ||| || || ||||||||||| | || | ||||||| ||||| ||||| || Sbjct 187822 CTGCAACAAGAAATCCAATCAGAAGAATTTGGGTACCATCAAGTGCTCCAATCTGTGCAC 187881 Query 19894 TGAAATCATGGAG---GTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCT 19950 || || || ||| ||||| ||| ||||| ||||| || || || || ||| | Sbjct 187882 GGAGATTATCGAGTACACCTCCAA---GGATGAGACCGCCGTCTGCAACCTCGCCTCCAT 187938 Query 19951 GTGCCT-GCCGACTTT-----CGTCAAGGCCTCCTCCTTCGACTTTGCCAA--ATTGTAC 20002 ||| | | ||| ||| || |||||| |||| | || Sbjct 187939 CGCCCTCAGCAAGTTTGTCGACGTGGAGAAGCAGGTGTTCGAC--CACCAACGCCTCTAT 187996 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| ||| || ||| ||| || ||||| |||||||| || || | | |||| Sbjct 187997 GAGGTCACCAAGGACGTTACGTACAACCTGAACCGCGTCATTGACCGCAGTTACTACC-- 188054 Query 20063 ACCGAGGCGGCGCGCAAGTCG---AATATGCGCCACCGGCCGATCGCGATCGGCGTCCAG 20119 ||| || | |||| | || ||||||||| ||||||| | ||||| ||| Sbjct 188055 -CCGTGGAAACTGCCAAGAGGAGCAACGAGCGCCACCGCCCGATCGGCCTTGGCGTGCAG 188113 Query 20120 GGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATC-CCAAGGCGCGCGA 20178 || || ||||| | || || | ||| | ||| | ||| |||| | |||||| | Sbjct 188114 GGGCTAGCCGATGCCTTTATTCTCCTCCGTCTCCCCTTC-ACGAGCGAGGAGGCGCAGAA 188172 Query 20179 GCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC---GA 20235 |||||| ||| ||||||||| || | ||| |||| || |||| || | | || Sbjct 188173 GCTCAATGAGGAGATCTTCGAGACCATCTACTACGCCGC---GGTGGAGTCCTCCACGGA 188229 Query 20236 ACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTAT 20295 ||||| | | ||| || || || ||||| |||||||| || || || ||||| | Sbjct 188230 CCTCGCGGAGGTGGAGGGTCCCTATGAGACCTTCAAGGGCAGCCCTGCCTCGGAGGGGAA 188289 Query 20296 CCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAG----TTTTGGAGC------GCCC 20345 || ||| ||| | | ||| | || | | ||| |||| | |||| Sbjct 188290 GCTGCAGTTCGACTTAT-GGGAGAAACAGCCCACGAGCGGCCGCTGGAACTGGGATGCCC 188348 Query 20346 TC---AAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGC 20402 || ||| || || ||| | ||| | || ||||| | ||| | |||||||||| Sbjct 188349 TCAAGAAGCGTGTCATGGAGA---AGGGGTTGCGTAACTCCCTCCTCCTGGCGCCCATGC 188405 Query 20403 CGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCA 20462 | |||||||| ||| | ||||| |||| ||||||||| |||||||| | |||| | | Sbjct 188406 CCACCGCCTCCACCTCTCAGATTCTGGGTAACAACGAGTGCTTCGAGCCCTTCACGTCGA 188465 Query 20463 ACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCC 20522 |||| ||| | |||||| ||| |||||||||| |||| |||||| | || || Sbjct 188466 ACATTTACGTCCGTCGTGTGCTGAGCGGTGAGTTCCCGGTGGTGAACAAGTATCTCGTGA 188525 Query 20523 GCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTCCGAGCCG 20582 ||| | ||| | | ||||| | || || ||||| || | Sbjct 188526 TGGACCTCATCAAGCGCAACCTGTGGAACGATGAGATCCGTAACGAAATCATCACCTTCA 188585 Query 20583 GCGGGAGCGTC-CAGGCAT--TGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCG 20639 ||| |||| | || | || ||||||| | || ||||||| | ||| | |||| Sbjct 188586 ACGGCTCCGTCGCTGGTGTGGCGGGTATCCCCGACGACATCAAGGAGCTCTACCGCACCG 188645 Query 20640 TATGGGAAATCCCACAG-AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATC 20698 | ||||| ||| | ||| ||| | ||||| ||||| || | |||| | || || Sbjct 188646 TGTGGGAGATCTCCCAGCGTCAGC-TGATCGATATGGCCGCGGCCCGCGCCAAGTATATT 188704 Query 20699 GACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCC--GAGCCTGGCGAAGCTGAGCT 20756 |||||||| ||||| | || ||| | | |||| || || | || | | | || Sbjct 188705 GACCAGTCGCAGTCCATGAACCTCTACCTCGAGAGCCCCTCCTCCGGCCGTA--TCACCT 188762 Query 20757 CCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACCC 20816 ||||||| | || ||||||| || || ||||||||||||||||| || || |||| Sbjct 188763 CCATGCACTTCCACTGCTGGCAGTCTGGACTGAAGACGGGCATGTACTACCTCCGCACCC 188822 Query 20817 G 20817 | Sbjct 188823 G 188823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522002523520