Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq106 161 1e-34 seq21 154 2e-32 seq37 143 3e-29 >seq106 Length=352803 Score = 161 bits (178), Expect = 1e-34 Identities = 684/1056 (65%), Gaps = 41/1056 (4%) Strand=Plus/Minus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 || || || ||||| ||||| | | |||||||||||||||||| ||| | || ||| Sbjct 188124 TCGGCTAGCCCCTGCACGCCAAGGCCGATCGGGCGGTGGCGCTCGTTGCTCCTCTTGGCA 188065 Query 80785 ---TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACC 80841 ||| | ||||| | | || |||||||||||||||||| ||||| || Sbjct 188064 GTTTCC---ACGGGGTAGTAACTGCGGTCAATGACGCGGTTCAGGTTGTACGTAACGTCC 188008 Query 80842 CGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCT--TC-ACAAA-TGC 80894 || || |||| || || |||||| || ||| || || ||||| | Sbjct 188007 TTGGTGACCTCATAGAGGCGTTGGTGGTCGAACACCTGCTTCTCCACGTCGACAAACTTG 187948 Query 80895 CGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA--GCATCTGTAAACTCG 80952 | || ||| | ||| || || ||||| ||||| ||| || | | |||| |||| Sbjct 187947 CTGAGGGCG-ATGGAGGCGAGGTTGCAGACGGCGGTCTCATCCTTGGAGGTGTA--CTCG 187891 Query 80953 ACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTG 81012 | || |||||||||| ||| || |||| || ||||||| || ||||| || || || Sbjct 187890 ATAATCTCCGTGCACAGATTGGAGCACTTGATGGTACCCAAATTCTTCTGATTGGATTTC 187831 Query 81013 GCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGG 81072 |||||| ||||||||||| |||| | ||| ||||||||| ||| ||| ||||| Sbjct 187830 TTGTTGCAGGCGTCCTTGTACAGCATGAAAGGGACGCCGGTCTCGGTCTGGGACATGAGG 187771 Query 81073 ATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTG-CGGAATTTGCCTTCGGCCACATA 81131 || | ||| | || ||||| | | |||| || || ||||| | || Sbjct 187770 ATCTCAAACCACAAGTCCTGCGCCGGAATCGTCTTGACGCCCATTCCCTTCTTTT-CGTA 187712 Query 81132 CTTGGCGTAAGCTTCG--TCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTC 81188 || |||| |||| ||||||| | |||| | ||| | | ||| ||| |||| | Sbjct 187711 CTCCTCGTA--CTTCCGCTCGAACTCCTCGCCGTAGCAGT-CGCTCAGGCCTGTGCACAC 187655 Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGG 81248 ||| ||| |||||| ||| | || | || ||| ||||||||| ||||| Sbjct 187654 GTTGGGGTCCATCAGCGTCCACTGTCCCTCCTCCTTGACACGCTTCATGAAGAGATCAGG 187595 Query 81249 GATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||| |||||| ||||| |||||| || ||||| | ||| ||| | Sbjct 187594 AATCCAAAGGGCGTAAAACAGATCGCGGGCACGTTGGTCCTCCTTACCGGTGTTTCGCTT 187535 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 || || || || | | ||| || ||||| ||||| || |||||||||| | || Sbjct 187534 CAGGCGGACGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTACACGGCGAAGGCACC 187475 Query 81369 CTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACAT 81425 ||| || || ||||||||||| ||||| ||||| || || || ||||| | ||| Sbjct 187474 CTTACGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTATTGAACACACGGAGCAT 187415 Query 81426 AGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGAC--CCCTTGGCGCGC 81483 || | || ||| | || |||||||||||| |||| | || || | ||| Sbjct 187414 GGGCACGAGACCGTTGGAGGTACCGTTCGTACCGGCGAT--GTAACTACCGGAAGAGCGG 187357 Query 81484 ACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTT--TGAAATCTGAGCACACCG 81539 | ||| ||| || || || || ||||| | | ||| ||| | |||| || Sbjct 187356 ATGTTG-TGAACGTGGAA-CCCAATACCACCGGCCGCCTTACTGATGGTGGCGCACTCC- 187300 Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599 || | ||| || ||||| || ||||| || || | |||||| | | | ||| ||| Sbjct 187299 -TTGAGGGTGTCGTAAATGCCATCGATACTGTCGTCCTTCATGGCCACGAGGAAGCAGGA 187241 Query 81600 TGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 ||||||||| | | ||||| |||||||| || ||||| ||||| | || | Sbjct 187240 ACTCATCTGAGGCTTCGGGGTACCGGCGTTGAACAGGGTAGGGGTGGCGTGGGTAAAGAA 187181 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACC 81719 | ||||| || || ||||| | ||| || | || || |||||||| Sbjct 187180 TCCCAAGGACATGAGATCGTAGGTGCGGCGAATGCGCTCCATGTTGTTTCCATGAATACC 187121 Query 81720 GATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 || || ||||||| | ||| | |||||| |||| Sbjct 187120 AATCGCCACACGCAATATCATTTGCTGGGGTCTCTC 187085 >seq21 Length=125516 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| || ||||| ||||| || | || ||||| ||| | | Sbjct 55188 AATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAG 55129 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||||| || || ||||||||||| || || || || ||||| Sbjct 55128 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCA 55069 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || ||||||||||| |||||||| | || ||||| || ||||| || Sbjct 55068 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAA 55009 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || || || || | || ||||||||||| Sbjct 55008 CATCCAGAAAGAGTCCACCCTCCACCTCGTGCTCCGCCTTCGCGGTGG 54961 >seq37 Length=265056 Score = 143 bits (158), Expect = 3e-29 Identities = 233/338 (69%), Gaps = 2/338 (1%) Strand=Plus/Plus Query 24585 GAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTAC 24644 ||||| || ||||| | |||||||| ||||| ||| |||| || || ||||| ||| Sbjct 163869 GAGGTGTACAACCTCGCCGCCCAGTCCCACGTGAAGGTGTCCTTCGAGACGCCCGACTAC 163928 Query 24645 AC-GGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNN 24703 || || ||| ||||||| | | ||||| || | || || || || || ||| Sbjct 163929 ACCGGACAA-GTGGATGGTATCGGCACGCTCAAGATCCTCGATGCGATCCGCTCCTGCGG 163987 Query 24704 NNNNNNNTTGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCA 24763 || | | | || || ||||| || || ||| | | ||| ||||| Sbjct 163988 GTTGGAGAAGACCTGCCGCTTCTACCAGGCCTCCACCAGCGAGCTCTACGGCCTCGTGCA 164047 Query 24764 GGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAA 24823 ||||| || ||||||||||| || || || || || || ||||| |||| |||| | || Sbjct 164048 GGAGATTCCCCAGTCGGAGACGACCCCCTTCTACCCCCGCAGCCCTTATGCGGTCGCCAA 164107 Query 24824 GGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAA 24883 | ||| ||| | ||||||| ||||||||||| ||| || | || || || || ||||| Sbjct 164108 GCTGTACGCCTTCTGGATAGTGAAGAACTACCGCGAGTCCTACGGCATGTACGCGTGCAA 164167 Query 24884 CGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGAC 24921 ||| ||||| |||||||| || || ||||| |||| Sbjct 164168 CGGTATTCTCTTCAACCACGAATCCCCCCGTCGAGGAC 164205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307491416960