Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq21 170 4e-37 seq57 113 1e-19 >seq21 Length=125516 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || ||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct 54967 CGAAGGCGGAGCACGAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCCGCGAGGGTG 55026 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || |||||||| || |||||||| || || || ||||| || || | ||| Sbjct 55027 CGGCCCTCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCT 55086 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||||||||| | || |||||||| Sbjct 55087 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGCTGGCCTCGACCTCGAGG 55146 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||| ||||| || ||||| ||||| || || | ||||||| Sbjct 55147 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATCTGCATT 55188 >seq57 Length=512779 Score = 113 bits (124), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 9/218 (4%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || |||||||| | || | || ||||| || || ||| || Sbjct 473110 AGCACGAGGTGCAGCGTCGACTCTTTCTCGACGCCGTAGTCCGCGAGCGT---TCCCTCG 473166 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||| | ||| |||||||| || || ||| |||| || ||| | | | Sbjct 473167 CCCAGCTGCTTGCCAGAGAAAATAAGGCGCTGCAAGTGAGGCGGAATGCCCTCCCTCTTC 473226 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||| ||||| ||||||| ||||| ||||| ||| || |||||||| ||| Sbjct 473227 TGGACCTTTTCCATCACGTTCTCGATCGTGTC---GCTCGCCTCCACCTCGAGGACAATC 473283 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | |||||| ||||| | |||||| || Sbjct 473284 GTCTTGCCGGTTAAAGTCTTCACAAAAATCTGCATGTT 473321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145940532920