Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20deanei_20[genbank_20GCA_5F001659865.1_202016-06-08] 408 sequences; 19,282,250 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 1e-13 >seq21 Length=125516 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||||||||| || |||||||| || || || ||| | ||||| || || ||| Sbjct 55188 AATGCAGATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGGCCAG 55129 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| |||||| | || || || || Sbjct 55128 CGACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCA 55069 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || || | ||||| | | || ||||| Sbjct 55068 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCGGACTACAA 55009 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 55008 CATCCAGAAAGAGTCCAC 54991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007919247264