Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq153 107 2e-18 seq4492 104 2e-17 seq799 96.9 3e-15 seq5385 89.7 4e-13 >seq153 Length=16899 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 9644 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 9585 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| || || ||| | || || | |||||||||| ||| Sbjct 9584 AGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 9525 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | ||| || || | || ||| Sbjct 9524 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 9465 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | || || || || |||||||| Sbjct 9464 TCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq4492 Length=1347 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 131 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 190 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || |||||||| || || || | || || | |||||||||| ||| Sbjct 191 AGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 250 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | ||| || || | || ||| Sbjct 251 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 310 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | || |||||||||||||| | || || || || |||||||| || Sbjct 311 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCATATT 360 >seq799 Length=7053 Score = 96.9 bits (106), Expect = 3e-15 Identities = 105/138 (76%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 || ||| || || || | |||||||| || | |||||||||||| || ||||| ||||| Sbjct 152 GTGTCCACCACGAAGGCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTC 93 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 ||| |||| | || | ||||| ||||| || || || | || || | |||||||||| Sbjct 92 CGCGAGGG-TCGGCCCTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGG 34 Query 21065 GGGCACGCCTTCCTTGTC 21082 ||| | ||| |||||||| Sbjct 33 GGGAATGCCCTCCTTGTC 16 >seq5385 Length=1056 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 898 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 839 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || || ||||| || || || | || || | |||||||||| ||| Sbjct 838 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 779 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | ||| || || | || ||| Sbjct 778 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 719 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| ||||| | || || || || |||||||| Sbjct 718 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | ||||||||||| || ||||| ||||| || Sbjct 213 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 154 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | || || ||||| || || || | || || | |||||||||| ||| Sbjct 153 AGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 94 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | ||| || || | || ||| Sbjct 93 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 34 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | || |||||||||||||| Sbjct 33 TCGAGGGCGATGGTCTTGCCGGT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422218271603348