Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3286 376 3e-99 seq4492 187 3e-42 seq5385 174 2e-38 seq153 168 7e-37 seq7439 140 3e-28 seq799 102 8e-17 >seq3286 Length=1922 Score = 376 bits (416), Expect = 3e-99 Identities = 608/864 (70%), Gaps = 18/864 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| |||| | || |||||| ||| |||||| | ||||| || || |||| ||| Sbjct 632 GAGCCCCTGCGCCAGGACAACCCCTACCGCTTCGTGCTGTTCCCGATCCAGTACCACGAC 691 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||| | |||||| || ||| | ||||||| | |||||| | || ||| Sbjct 692 ATCTGGAAGAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGATCTG 751 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 || ||| || |||||| || ||| || ||||| || ||||||||| || Sbjct 752 GGAAATGACCTGACGGACTGGAAGAAGATGACGGAGGGCGAGCAGCACTTCATCAAGTAC 811 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||||| ||||| ||||| | ||||||||||||||| | ||||| || | |||| ||| Sbjct 812 GTGCTTGCCTTCTTCGCTGGCAGCGACGGCATCGTGATTGAGAACCTCGCGCAGCGCTTC 871 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGC-TTCTACGGCTTTCAGATCGCCATGGA 116874 ||| || ||||| | ||||| || ||| ||||||||||| ||| | ||||| Sbjct 872 ATGTCGGACGTCAAGGTGCCGGAGGCCCG-TGCGTTCTACGGCTTCCAGCTGATGATGGA 930 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTG-CGCTCTTCGGAGG 116933 |||| | ||||| || | || || || | ||||||||| | || | || ||| Sbjct 931 GAACATCCACTCCGAGACCTACTCTGTGCTGCTGGACACGTACATCACGGACAGCG-AGG 989 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||||||| || || |||| ||| ||||||| |||||| || | ||||||| |||| Sbjct 990 AGAAGCTGAAGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGT 1049 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 ||||| |||||||||||| | || ||||| |||| ||||||||| | | || | Sbjct 1050 GGGCGGTGCGCTGGATCG---GAAGCGAGGCGAGCTTCCAGGAGCGCCTGCTCGGGTTTG 1106 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 |||| || |||||| ||||||| || ||| ||| ||| || || ||||| ||||| | Sbjct 1107 CGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCGATCTTCTGGCTGAAGAAGC 1166 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 ||||| | |||||||||||||| |||||||||||||| || ||| | ||||||||||||| Sbjct 1167 GCGGCGTGATGCCCGGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGGGTCTGC 1226 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGC--GACCGAG----CGCG- 117226 | |||||||| || |||||| ||| || | || | || | || |||| Sbjct 1227 ACACGGACTTTGCGTGCCTGCTGTACAA-CA---GCCACATCAAGAACAAGCTGTCGCGC 1282 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | |||||| | | ||| ||||||| || || | ||||||| || ||| || ||| Sbjct 1283 GAGCGCGTGCTGAACATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCATCTGCGAG 1342 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 | || || ||||| ||| | || | || | || | |||| || ||||| |||||| Sbjct 1343 TCCCTCCCCGTGCGCCTGATTGGTATGAACTCGGAGATGATGAGCCAGTACATTGAGTTC 1402 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || || ||| | |||||| || || | || || |||||||||||| || | ||||| Sbjct 1403 GTGGCGGACCGTCTGCTGGTCTCCCTTGGCGAGGCGAAGCACTACAACGCGACGAACCCC 1462 Query 117407 CTGGACTTTATGAACCTCATCTCC 117430 | ||||| ||| | | |||||| Sbjct 1463 TTCGACTTCATGGAGATGATCTCC 1486 >seq4492 Length=1347 Score = 187 bits (206), Expect = 3e-42 Identities = 172/215 (80%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||| |||||||| ||||| || || ||||| ||||| |||||| || |||| ||||| Sbjct 362 GAAATATGCAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGT 303 Query 40745 CCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803 ||| ||||| | | | |||| | |||| || |||| ||||| |||||||||||| || Sbjct 302 CCAGCGACACCATCGAGAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCG 244 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 |||||||| || ||||||| ||| || || |||||||| || | ||||||||| |||| Sbjct 243 GACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTGGAAGAGGGCCGCACCCTCGCCGAC 184 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||||| |||| || ||||| || Sbjct 183 TACAACATCCAGAAGGAGTCCACCCTCCATCTCGT 149 >seq5385 Length=1056 Score = 174 bits (192), Expect = 2e-38 Identities = 166/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || |||||| || |||| ||||| ||| | Sbjct 672 ATGCAAATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGTCCAGC 731 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || |||| ||||| |||||||||||| ||||||| Sbjct 732 GACACCATCGAGAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 790 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | ||||||||| ||||||||| Sbjct 791 GCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAAGGTCGCACCCTCGCCGACTACAA 850 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 851 CATCCAGAAGGAGTCCACCCTCCATCTCGT 880 Score = 159 bits (176), Expect = 4e-34 Identities = 154/195 (79%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AAC 40763 || || ||||| ||||| |||||| || |||| ||||| ||| ||||| | | | ||| Sbjct 2 AAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAAC 61 Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823 | | |||| || |||| ||||| |||||||||||| |||||||||| || ||||||| Sbjct 62 G-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTT 120 Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883 ||| || || ||||| || || | ||||||||| |||||||||||||||||||||| | Sbjct 121 CGCCGGTAAGCAGCTCGAAGAAGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTC 180 Query 40884 CACGCTGCATCTAGT 40898 ||| || ||||| || Sbjct 181 CACCCTCCATCTCGT 195 >seq153 Length=16899 Score = 168 bits (186), Expect = 7e-37 Identities = 165/210 (79%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| |||||| || |||| ||||| ||| | Sbjct 9418 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGC 9477 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || |||| ||||| |||||||||||| ||||||| Sbjct 9478 GACACCATCGAGAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 9536 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || ||||| || || | ||||||||| ||||||||| Sbjct 9537 GCAGCGCCTCATCTTTGCCGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAA 9596 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 9597 CATCCAGAAGGAGTCCACCCTTCATCTCGT 9626 >seq7439 Length=588 Score = 140 bits (154), Expect = 3e-28 Identities = 138/176 (78%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 40724 CCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTC 40782 ||||| || |||| ||||| ||| ||||| | | | |||| | |||| || || | Sbjct 1 CCATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAACG-TGAAGGCTAAGATCCAG 59 Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||||||| |||||||||| || ||||||| ||| || || ||||| || Sbjct 60 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAA 119 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | ||||||||| |||||||||||||||||||||| |||| || ||||| || Sbjct 120 GAAGGTCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGT 175 >seq799 Length=7053 Score = 102 bits (112), Expect = 8e-17 Identities = 106/138 (77%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827 |||| || |||| ||||| |||||||| ||| |||||||||| || || |||| ||| Sbjct 1 AAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCT 60 Query 40828 GGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACG 40887 || || ||||| || || | || |||||| ||||||||||||||||||||| |||| Sbjct 61 GGTAAGCAGCTCGAGGAGGGCCG-ACCCTCGCGGACTACAACATCCAGAAGGAGTCCACT 119 Query 40888 CTGCATCTAGTGTTGCGC 40905 || || | ||| | ||| Sbjct 120 CTTCACTTGGTGCTCCGC 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515167980771280