Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5385 116 3e-21 seq153 116 3e-21 seq4492 114 1e-20 seq7439 91.5 1e-13 seq753 91.5 1e-13 seq799 86.0 5e-12 >seq5385 Length=1056 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | ||||| || |||||||| Sbjct 874 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGC 815 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| |||||||| || || || |||||||||||||| ||| || Sbjct 814 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 755 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| || ||||||||||| || | || || ||||| Sbjct 754 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTG 695 Query 118716 AGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || ||||| ||||| ||| Sbjct 694 AGGGTCTTCACGAAAATTTGCATAGCT 668 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | ||||| || |||||||| Sbjct 189 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGC 130 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| |||||||| || || || |||||||||||||| ||| || Sbjct 129 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 70 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| || ||||||||||| || | || |||||||| Sbjct 69 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTG 10 Query 118716 AGAGTTTT 118723 || || || Sbjct 9 AGGGTCTT 2 >seq153 Length=16899 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | ||||| ||||||||||| || || Sbjct 9614 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCG 9555 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||| |||||||| || || || |||||||||||||| ||| || || Sbjct 9554 GCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 9495 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| || ||||||||||| || | || |||||||| || || Sbjct 9494 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTC 9435 Query 118722 TTTACAAAAATCTGCATGG 118740 || || || || ||||||| Sbjct 9434 TTCACGAAGATTTGCATGG 9416 >seq4492 Length=1347 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | ||||| || || ||||| Sbjct 155 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGC 214 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| |||||||| || || || |||||||||||||| ||| || Sbjct 215 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 274 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| || ||||||||||| || | || |||||||| Sbjct 275 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTG 334 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||| ||||| Sbjct 335 AGGGTCTTCACGAAAATTTGCAT 357 >seq7439 Length=588 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | ||||| || |||||||| Sbjct 169 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGC 110 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| |||||||| || || || |||||||||||||| || || Sbjct 109 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTA 50 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGG 118698 || || | |||| |||||| || ||||||||||| || Sbjct 49 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGG 7 >seq753 Length=7390 Score = 91.5 bits (100), Expect = 1e-13 Identities = 129/181 (71%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 134125 TCTTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAATCGCGAGCTT 134184 |||| || || |||||||| |||||||| ||||| ||| || | | ||| || || Sbjct 3707 TCTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGATCACGGGCAC 3766 Query 134185 TAGTGTCTTCGGAGCCCATGTTGCGTCTCAAGTTGAGAAACTCATAAATTTCCGGATGCC 134244 |||| || || |||| || ||| | || |||||| |||| || | |||| Sbjct 3767 GGTTGTCCTCCTTACCGGTGTTACGCTTCAGGAGAAGGAACTCAAAAATGTCGGCGTGCC 3826 Query 134245 ACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGCTTACCACC---CTGGTCGACGTGAC 134301 | ||||||| |||| |||| | |||||| |||| |||||| || ||||||||||| || Sbjct 3827 AGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCTTACCGCCGCCCTGGTCGACGTAAC 3886 Query 134302 G 134302 | Sbjct 3887 G 3887 >seq799 Length=7053 Score = 86.0 bits (94), Expect = 5e-12 Identities = 90/117 (77%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||| || | || || ||||| Sbjct 131 CACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCGGCCC-TCCTC 73 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 |||||| || |||||| |||| ||||||||||| || || || |||||||||||||| Sbjct 72 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433788350039476