Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4492 118 1e-21 seq153 116 4e-21 seq5385 111 2e-19 seq799 89.7 6e-13 seq7439 87.8 2e-12 >seq4492 Length=1347 Score = 118 bits (130), Expect = 1e-21 Identities = 146/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 166 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAA 225 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 226 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 284 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||||| || || || |||| | |||||| ||||| || || ||||| | Sbjct 285 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCA 344 Query 43171 CAAAGATTTGCATTTTT 43187 | || |||||||| ||| Sbjct 345 CGAAAATTTGCATATTT 361 >seq153 Length=16899 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || ||||||||||| || || Sbjct 9609 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAA 9550 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 9549 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 9491 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||||| || || || |||| | |||||| ||||| || || ||||| | Sbjct 9490 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCA 9431 Query 43171 CAAAGATTTGCAT 43183 | ||||||||||| Sbjct 9430 CGAAGATTTGCAT 9418 >seq5385 Length=1056 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 863 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAA 804 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 803 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 745 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | |||||||| || || || |||| | |||||| || || || || ||||| | Sbjct 744 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCA 685 Query 43171 CAAAGATTTGCAT 43183 | || |||||||| Sbjct 684 CGAAAATTTGCAT 672 Score = 102 bits (112), Expect = 9e-17 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 178 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAA 119 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 118 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 60 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 || | | |||||||| || || || |||| | |||||| ||||| || || ||||| Sbjct 59 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq799 Length=7053 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || ||||| || | | || | |||||| || | ||| |||||| || || ||||| Sbjct 154 TAGTGTCCACCACGAAGGCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAG 95 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || || || ||| || | || || ||||||||||||||||| || || ||||||||||| Sbjct 94 TCCGCGAGGGTCGGCCC-TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCC 36 Query 43071 GCCGGCACGCTCTCCTTGTCC 43091 | || | || |||||||||| Sbjct 35 GGGGGAATGCCCTCCTTGTCC 15 >seq7439 Length=588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 158 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAA 99 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 98 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 39 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | | | |||||||| || || || |||| | ||||| Sbjct 38 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571760754182840