Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4492 105 4e-18 seq5385 96.9 2e-15 seq153 96.9 2e-15 >seq4492 Length=1347 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| | || |||| |||||| || ||||| Sbjct 167 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAG 226 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || ||||||||| ||||| ||| | | Sbjct 227 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTC 286 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| || | | |||||| ||||||||||| || ||||| Sbjct 287 TCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACG 346 Query 34379 AAGATCTGCAT 34389 || || ||||| Sbjct 347 AAAATTTGCAT 357 >seq5385 Length=1056 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || || | || || | |||||| || ||||| Sbjct 862 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAG 803 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || ||||||||| ||||| ||| | | Sbjct 802 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTC 743 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| || | | |||||| || |||||||| || ||||| Sbjct 742 TCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACG 683 Query 34379 AAGATCTGCATCGCTC 34394 || || ||||| |||| Sbjct 682 AAAATTTGCATAGCTC 667 Score = 89.7 bits (98), Expect = 3e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| | || || | |||||| || ||||| Sbjct 177 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAG 118 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || ||||||||| ||||| ||| | | Sbjct 117 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTC 58 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | || | ||| | || ||||| || | | |||||| ||||||||||| || ||| Sbjct 57 TCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTC 1 >seq153 Length=16899 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| | || || | |||||| || || || Sbjct 9608 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAG 9549 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||||||||| ||| | || ||||||||| ||||| ||| | | Sbjct 9548 ATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTC 9489 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | || ||||| || | | |||||| |||||||| || || ||||| Sbjct 9488 TCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACG 9429 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 9428 AAGATTTGCAT 9418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323040685539680