Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4492 109 4e-19 seq153 102 6e-17 seq5385 100 2e-16 >seq4492 Length=1347 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| |||||||||||| || ||| | || ||||| || Sbjct 155 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGC 214 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | ||||| ||||| || || | |||||||||||| ||| || Sbjct 215 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 274 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | |||| | ||| ||||| | || || |||||||| || Sbjct 275 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTG 334 Query 45314 AGAGTCTTCACAAAGATTTGCATGTTGCCT 45343 || |||||||| || |||||||| || ||| Sbjct 335 AGGGTCTTCACGAAAATTTGCATATTTCCT 364 >seq153 Length=16899 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| |||||||||||| || ||| | || || || || Sbjct 9620 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGC 9561 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || ||||| || || | ||||| ||||| || || | |||||||||||| ||| || Sbjct 9560 TTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 9501 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | |||| | ||| ||||| | || || |||||||| || Sbjct 9500 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTA 9441 Query 45314 AGAGTCTTCACAAAGATTTGCATG 45337 || |||||||| |||||||||||| Sbjct 9440 AGGGTCTTCACGAAGATTTGCATG 9417 >seq5385 Length=1056 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| |||||||||||| || |||| | || || || || Sbjct 874 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGC 815 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | ||||| ||||| || || | |||||||||||| ||| || Sbjct 814 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 755 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | |||| | ||| ||||| | || || ||||| || || Sbjct 754 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTG 695 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| || |||||||| Sbjct 694 AGGGTCTTCACGAAAATTTGCAT 672 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| |||||||||||| || ||| | || || || || Sbjct 189 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGC 130 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | ||||| ||||| || || | |||||||||||| ||| || Sbjct 129 TTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTA 70 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | | |||| | ||| ||||| | || || |||||||| || Sbjct 69 GCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTG 10 Query 45314 AGAGTCTTC 45322 || |||||| Sbjct 9 AGGGTCTTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395036906472013