Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq753 351 9e-92 seq3286 246 3e-60 seq4492 89.7 5e-13 >seq753 Length=7390 Score = 351 bits (388), Expect = 9e-92 Identities = 1102/1692 (65%), Gaps = 27/1692 (2%) Strand=Plus/Plus Query 22108 GTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGT 22167 |||||| || |||| ||||| | |||| | |||||| || || |||||||| || Sbjct 2472 GTCCACGGTGAACTTGATGGCATCGACGGCGGCGCGGGTGCGGAGGTAGTACATGCCGGT 2531 Query 22168 CTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAA 22227 ||| || || || ||| || || || || || || | | || | || || | Sbjct 2532 CTTGAGGCCGGACTGCCAGCAGTGGAAGTGCATGGAGGTGATCTGGCCGGAGCTGGGGGA 2591 Query 22228 GTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCAT 22287 |||| | | | ||| | |||||| ||| || ||| || | || |||||| ||| Sbjct 2592 CTCCAGGAAGAGATTCATGGACTGAGACTGGTCAATATACTTGGCGCGGGCGGCGGACAT 2651 Query 22288 ATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAA 22347 | |||| | ||| || || ||||| ||||| ||| || | | | | || Sbjct 2652 GTCAATCAGCTTGCGCTGCGGAATCTCCCAAACGGTGCGGTAGAGCTCCTTCAGATCATC 2711 Query 22348 CGGTATCGATTCGATCCTCTGGACGGACCCGTT-ATTGTGTATGATCAAATTTTTAATCG 22406 ||| || ||||| | | ||||||| ||||| | ||| ||||| || | | Sbjct 2712 CGGGATACCGTCGATTCGCAGGACGGAGCCGTTGAAGGTG-ATGATTTCGTTACGCAGCT 2770 Query 22407 TATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAA 22466 | || ||||||| ||| |||| | | || ||||| || | |||||| || | | Sbjct 2771 TCTCATTCCACAGACCACGGGCGATGAGGTCCTTGACAAGGTATTTGTTCACAACCGGGA 2830 Query 22467 ACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCAT 22526 |||| || || ||||| ||||||||||| ||||| || ||||| | |||| Sbjct 2831 ACTCCCCACTCAGCGTACGGCGGACGTAAATGTTGGTGGTGAAGGGCTCGAAGCACTCAT 2890 Query 22527 TGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTC 22586 |||| || || || ||| ||| || ||||| ||||||||||||| || || ||||||| Sbjct 2891 TGTTACCGAGAATTTGACTGGTGGAGGCGGTGGGCATCGGCGCCACCAACAGAGAGTTTC 2950 Query 22587 TCAAGCCGTGCTT--TGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGG 22644 || ||| | | ||| | || | || || ||||| ||| | || | Sbjct 2951 GCATACCGGTCGTCTTGACGCGCTCCTTCAGGGCGTC--CCAGTTCCAGCGGCCGCTCAC 3008 Query 22645 CGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTA 22704 || | || ||||| | |||| | |||| | ||| | || |||||||| | Sbjct 3009 CGGCTTCTTCTCCCAGAGATCGAACTGCAGAAGGCCTTGGGAGGCGGGGCTGCCGGGAAA 3068 Query 22705 CGTTTCGTACGGACCATATATCGCGGC-AAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763 ||||| ||||| || | | ||| || |||| | | | | ||||| |||| |||| | Sbjct 3069 GGTTTCATACGGTCCCTCCACCGCCGCCAAGTCCACGGAG-GACTCCACCGCGGCGTAGT 3127 Query 22764 ATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGT--ACGGCAT 22821 | || ||||||||||| | || |||||| | || ||| | | | |||| | || | Sbjct 3128 AGATGGTCTCGAAGATGTCCTCGTTCAA--CCGCTGCGCCTCCTCGCTCGTGAAGGGGAG 3185 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 || | | | || |||||||||| ||||| ||||| | |||| ||| |||||| Sbjct 3186 GCGAAGGAGAATAAAGGCGTCCGCCAACCCCTGCACGCCGAGGCCGACCGGGCGGTTTCG 3245 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 || || | | ||| || || || | || || || || ||| | Sbjct 3246 CATGTTACTGCGTCTGGCCGTTTCCACGGGGTAGTAGTTGCGGTCAATGACTCGGTTGAG 3305 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATT- 23000 || |||||| || || | | ||| | |||||| | Sbjct 3306 ATTGTAGGTCACGTCCTTGGTGACCTCGTAGAGCTTCTGGTGGTCAAAGACGCCCTTCTC 3365 Query 23001 -GTA-CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTT 23058 || | || || | || |||||| ||||| | ||||| || ||| |||||| || Sbjct 3366 GGTGTCCACGAAGCGGGGGAGGGCGATGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTT 3425 Query 23059 GGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT 23118 | |||||||| | ||| ||||| || || ||| ||||| || ||||||| ||| | Sbjct 3426 GCTGGTGTACTCCATAATCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGATTTTT 3485 Query 23119 CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGAC 23178 ||||||| ||||| ||||| || |||||||| |||||| | || || ||||| || Sbjct 3486 CTGGTTGGACTTTCGGTTGCAAGAGTCCTTGTACAGCATGAAAGGGACACCGGTCTCCAC 3545 Query 23179 CTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCC 23238 ||| ||||| | || || ||||| || ||| | || | | | || Sbjct 3546 CTGGGACTCCAGAATGGCGAACCACAGCTCTTGCGCGGCGATGGTGCGGATGCCCAGACC 3605 Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298 | | |||||||| | |||| | ||||| || | |||| |||||| |||||| Sbjct 3606 CTGTCTCTCGTACTCCTCGTACTTCTTCTCAAACTCCTCGCCGTGGCAGTCGCTCAGGCC 3665 Query 23299 GG-GC-GATTGCATCGGACAC-ATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355 || || ||| || || | || || ||||| | || | | || || |||| Sbjct 3666 GGTGCAGAT---ATGGGGGTCCATCAGCGTCCACTTGCCCTCGCTCTTGACACGCTTCAT 3722 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 || ||||| || ||||| || |||||||| || || ||||| || ||||| || || Sbjct 3723 GAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACC 3782 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 |||||| |||| | || || || | ||| || ||||| ||||||||||| || Sbjct 3783 GGTGTTACGCTTCAGGAGAAGGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGAC 3842 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 |||||| || ||| ||||||| ||||||||| |||||||||||||| || || || | Sbjct 3843 GGCAAAGGCACCCTTTCTCTTACCGCCGCCCTGGTCGACGTAACGGGCGGTATTATTCCA 3902 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACC 23595 ||| | ||||||||||| | |||||| |||| ||| | | | || || | ||| Sbjct 3903 CACGCGAAGCATCGGCACTAAACCGTTCGACGTCCCG--TTGGTAC-CCGCAATGTAACT 3959 Query 23596 TTTTGC---TCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 | || |||| |||||| ||||||||||| ||||| ||| | || || || || Sbjct 3960 TCCGGCGGAACGAATGTTGTGCACGTGGAAACCGATGCCACCGGCAGACTTGCTGATGAT 4019 Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712 ||||||| ||||| || ||||||||||||||||| ||||| || || | || ||||| Sbjct 4020 GGCGCATTCCTTCAGCGTATCGTAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAA 4079 Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772 ||| || ||| ||| || | ||||| ||| |||| ||| || || ||| ||||||| Sbjct 4080 GAAGCAAGAACTCATCTGAGGGTTGGGGGTACCGGCGTTGAAGAGGGTGGGGGTGGCGTG 4139 Query 23773 CGTAAAGTATCC 23784 || ||||| || Sbjct 4140 GGTGAAGTAGCC 4151 >seq3286 Length=1922 Score = 246 bits (272), Expect = 3e-60 Identities = 467/675 (69%), Gaps = 18/675 (3%) Strand=Plus/Plus Query 57765 GTGACGGAGGCGAGATGCTTT-TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGA 57823 ||| ||||||| | ||| || ||||| || || || || || ||| | || || || Sbjct 887 GTGCCGGAGGCCCG-TGCGTTCTACGGCTTCCAGCTGATGATGGAGAACATCCACTCCGA 945 Query 57824 AATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTT 57883 | || || | || | || |||||| | | ||||| ||| ||||| | | ||| | Sbjct 946 GACCTACTCTGTGCTGCTGGACACGTACATCACGGACAGCGAGGAGAAGCTGAAGCTGCT 1005 Query 57884 CAACGCGATCGAAACAATGCCCGCG-ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGA 57942 |||||||| | || || |||| | ||| |||||||| |||||| | | |||| Sbjct 1006 GCACGCGATCCAGACGAT-CCCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGA 1064 Query 57943 TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTA 58002 | ||||| ||| | ||| ||| | || ||| ||| || || || || || | Sbjct 1065 TCGGAAGCGA---GGCGAGCTTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCA 1121 Query 58003 TATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCC 58061 | ||||| || ||| ||| |||| | || || ||| ||||||| |||||| |||||||| Sbjct 1122 TCTTCTTCTCCGGCTCCTTCTGCG-CGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCC 1180 Query 58062 GGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCG 58121 |||||||| || ||||||||| |||| || || ||||||||||| || || || |||||| Sbjct 1181 GGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCG 1240 Query 58122 TGCCTAATGT---ACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATT 58178 ||||| ||| || ||||| || || | | |||| || ||| | || |||| Sbjct 1241 TGCCTGCTGTACAACAGCCACATCAAGAACAAGCTGTCGCGCGAGCGCGTGCTGAACATC 1300 Query 58179 ATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATG 58238 |||||||| || || | ||||| || ||||| || ||| |||| || ||| | || Sbjct 1301 ATCACCGATGCCGTGGACATCGAGAAGGAGTTCATCTGCGAGTCCCTCCCCGTGCGCCTG 1360 Query 58239 CTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTG 58298 | ||||||||| || ||||| ||||||||||||| || || ||| | || || Sbjct 1361 ATTGGTATGAACTCGGAGATGATGAGCCAGTACATTGAGTTCGTGGCGGACCGTCTGCTG 1420 Query 58299 CTCGAACTGATTGGAGA-GCG--TCATTACAACACGAAAAATCCGTTTGATTTTATGAAT 58355 || | |||| || ||| || |||||| ||| || || || || || ||| | Sbjct 1421 GTCTCCC---TTGGCGAGGCGAAGCACTACAACGCGACGAACCCCTTCGACTTCATGGAG 1477 Query 58356 CTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAA 58415 ||||||| ||| |||||||| ||||| ||||| || || ||| | || || || || Sbjct 1478 ATGATCTCCCTCCCTGGCAAGACCAACTTCTTCGAGAAGAAGGTTGGTGACTACCAGAAG 1537 Query 58416 TACGGCGTGATGAGC 58430 ||| ||||||||| Sbjct 1538 GCCGGTGTGATGAGC 1552 >seq4492 Length=1347 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||||||||| ||||| || || ||||| || ||| || |||| || || | Sbjct 361 AAATATGCAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTC 302 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| |||| | || || | || ||||||||| ||| | || || || Sbjct 301 CAGCGACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGA 242 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || || ||||| || || ||| ||||||| Sbjct 241 CCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTGGAAGA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445722085247760