Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3286 93.3 3e-14 >seq3286 Length=1922 Score = 93.3 bits (102), Expect = 3e-14 Identities = 251/377 (67%), Gaps = 9/377 (2%) Strand=Plus/Plus Query 22753 TTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCATATTCTGGCTGAA 22811 |||||||| || || ||| || | || || || || || |||| | || ||||||||||| Sbjct 1103 TTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCG-CGATCTTCTGGCTGAA 1161 Query 22812 GAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGG 22871 ||| || | ||||| || || | || ||||||| ||||| ||||||||| || Sbjct 1162 GAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGGG 1221 Query 22872 TCTACACTGTGACTTTGCTTGTATGCTGT---TTAGGCAAATGGCAAACAAACCGTGTCA 22928 ||| ||| |||||||| || |||||| || || || ||||| | || | Sbjct 1222 TCTGCACACGGACTTTGCGTGCCTGCTGTACAACAGCCACATCAAGAACAAGCTGTCGCG 1281 Query 22929 GGA-CG-ATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986 || || ||| | | ||||| | |||||||| ||||| |||| || ||| || Sbjct 1282 CGAGCGCGTGCTGA--ACATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCATCTGC 1339 Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046 ||| | || | ||| |||||||||| || | ||||| | |||||| || Sbjct 1340 GAGTCCCTCCCCGTGCGCCTGATTGGTATGAACTCGGAGATGATGAGCCAGTACATTGAG 1399 Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAAT 23106 || || || || || ||||| | |||| || | || ||| || |||| | || Sbjct 1400 TTCGTGGCGGACCGTCTGCTGGTCTCCCTTGGCGAGGCGAAGCACTACAACGCGACGAAC 1459 Query 23107 CCATTTGATTTCATGGA 23123 || || || |||||||| Sbjct 1460 CCCTTCGACTTCATGGA 1476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356199071279059