Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5385 87.8 2e-12 seq153 86.0 6e-12 seq4492 82.4 8e-11 >seq5385 Length=1056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||||||||||| ||||| Sbjct 868 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCG 809 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 || |||| || || ||||| || || || ||||| || ||||| ||| | || | || Sbjct 808 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC-CTGAATCTTAGCCTT 750 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | |||||| ||| ||| ||||| | || | ||||| ||||| | || Sbjct 749 CACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGT 690 Query 139747 TTTTACGAATATTTGCATAGCT 139768 || ||||| |||||||||||| Sbjct 689 CTTCACGAAAATTTGCATAGCT 668 >seq153 Length=16899 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || ||||| || || ||||| || ||| | |||| || |||||||| Sbjct 9620 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGC 9561 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 ||||| ||| |||| || || ||||| || || || ||||| || ||||| ||| | || Sbjct 9560 TTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTT 9502 Query 139682 TGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | || | | || | |||||| ||| ||| ||||| | || | ||||||||||| Sbjct 9501 AGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGT 9442 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | || || ||||| |||||||| Sbjct 9441 AAGGGTCTTCACGAAGATTTGCAT 9418 >seq4492 Length=1347 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || ||| | |||| ||||| ||||| ||||| Sbjct 161 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGCTTACCG 220 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| || || || ||||| || ||||| ||| | || | || Sbjct 221 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTT 279 Query 139688 AGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | |||||| ||| ||| ||||| | || | ||||||||||| | || Sbjct 280 CACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGT 339 Query 139747 TTTTACGAATATTTGCATA 139765 || ||||| ||||||||| Sbjct 340 CTTCACGAAAATTTGCATA 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496014685037600